RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PEX11GQ96HA9 241 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 FAM111AQ96PZ2 611 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 F2RL3Q96RI0 385 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 RBCK1Q9BYM8 510 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 TRIM55Q9BYV6 548 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 STMN4Q9H169 189 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 C12orf65Q9H3J6 166 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 PRM3Q9NNZ6 103 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 ACSS2Q9NR19 701 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 ZNF225Q9UK10 706 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 SNX6Q9UNH7 406 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 ACTL7BQ9Y614 415 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 LOC102723996A0A087X1L8 192 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 A0A0G2JN53 185 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 MKRN2OSH3BPM6 223 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 PPP6CO00743 305 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 PLPP1O14494 284 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 TYROBPO43914 113 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 ALOX12BO75342 701 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 SPAG7O75391 227 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 DNAJB5O75953 348 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 OR4F21O95013 312 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 HPP00738 406 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 TGFB1P01137 390 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 MYZAPP0CAP1 466 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 C8orf89P0DMQ9 161 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 COX6A1P12074 109 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 TSPAN8P19075 237 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 HIST1H1TP22492 207 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 PTX3P26022 381 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 SSR2P43308 183 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 RAB38P57729 211 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 RPS13P62277 151 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 RHAGQ02094 409 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 ASPHQ12797 758 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 CHAF1BQ13112 559 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 AIMP2Q13155 320 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 RCN2Q14257 317 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 CFAP157Q5JU67 520 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 DEPDC1Q5TB30 811 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 MFSD4BQ5TF39 518 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 TTC19Q6DKK2 380 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 ZNF793Q6ZN11 406 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 QSOX2Q6ZRP7 698 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 UBE3DQ7Z6J8 389 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 RNF175Q8N4F7 328 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 CCNYL1Q8N7R7 359 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 EXD3Q8N9H8 876 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 TCP10LQ8TDR4 215 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 AGAP11Q8TF27 550 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 METTL21AQ8WXB1 218 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 RGMAQ96B86 450 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 BBC3Q96PG8 261 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 SERPINI1Q99574 410 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 OR51B5Q9H339 312 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 ELOVL6Q9H5J4 265 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 BRF2Q9HAW0 419 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 LYRM4Q9HD34 91 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 PRDM7Q9NQW5 492 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 RIC8BQ9NVN3 520 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 SLC17A7Q9P2U7 560 aa11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 C19orf25Q9UFG5 118 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 PCDHGA9Q9Y5G4 932 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-209ENST00000552896 IGHV1-45A0A0A0MS14 117 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 SYNDIG1LA6NDD5 238 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 CDC123O75794 336 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ESRRBO95718 433 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 KRT6AP02538 564 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 KRT6BP04259 564 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 HSD3B1P14060 373 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ATP5A1P25705 553 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 HSD3B2P26439 372 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 KRT6CP48668 564 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 NAGLUP54802 743 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 LIM2P55344 173 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 SOX8P57073 446 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 EEF1A2Q05639 463 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ZNF33BQ06732 778 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 CSTF3Q12996 717 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 LY6DQ14210 128 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ABRAXAS2Q15018 415 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 AP5B1Q2VPB7 878 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 OR4C11Q6IEV9 310 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 NUDT13Q86X67 352 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 C10orf107Q8IVU9 208 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 SCUBE1Q8IWY4 988 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 SHISA5Q8N114 240 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ZCCHC7Q8N3Z6 543 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 CDYL2Q8N8U2 506 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ACOT4Q8N9L9 421 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 PLPP5Q8NEB5 264 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 C9orf43Q8TAL5 461 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 C8orf44Q96CB5 159 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 MESP1Q9BRJ9 268 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 TRMOQ9BU70 441 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ZNF717Q9BY31 904 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ZNF700Q9H0M5 742 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 CENPHQ9H3R5 247 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 MID1IP1Q9NPA3 183 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms