RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 UNC50Q53HI1 259 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 AGBL2Q5U5Z8 902 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 HHATQ5VTY9 493 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 TCTN3Q6NUS6 607 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 KBTBD2Q8IY47 623 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 ACOT4Q8N9L9 421 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 OR4F6Q8NGB9 312 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 WDR20Q8TBZ3 569 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 ADAMTS17Q8TE56 1095 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 FAM111AQ96PZ2 611 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 TMEM237Q96Q45 408 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 MTERF1Q99551 399 aaKnown RBP9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 LPAR4Q99677 370 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 FAIM2Q9BWQ8 316 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 DDX31Q9H8H2 851 aaKnown RBP9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 MID1IP1Q9NPA3 183 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 KCNK9Q9NPC2 374 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC22A11Q9NSA0 550 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 P4HTMQ9NXG6 502 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 ABI3Q9P2A4 366 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 CTSFQ9UBX1 484 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 DAPP1Q9UN19 280 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 MAPRE3Q9UPY8 281 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 RNF11Q9Y3C5 154 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 ZNF451Q9Y4E5 1061 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 LOC102723996A0A087X1L8 192 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 TMEM114B3SHH9 223 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC28A1O00337 649 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 RGS14O43566 566 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 TYROBPO43914 113 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 NRP2O60462 931 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 CTNSO60931 367 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 TGFB1P01137 390 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 UQCRHP07919 91 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 FGF4P08620 206 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 SBK3P0C264 359 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 CD22P20273 847 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ATP5A1P25705 553 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ACSM2AQ08AH3 577 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 STX4Q12846 297 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 HYAL2Q12891 473 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 KCNAB2Q13303 367 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ABRAXAS2Q15018 415 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 FBXO48Q5FWF7 155 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 TNFAIP8L3Q5GJ75 292 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 DCAF10Q5QP82 559 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 C6orf163Q5TEZ5 329 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 VWA5B1Q5TIE3 1220 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ATG16L1Q676U5 607 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ACSM2BQ68CK6 577 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 TMEM205Q6UW68 189 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 COX15Q7KZN9 410 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 GPR180Q86V85 440 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ZC3H7AQ8IWR0 971 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 FAM9CQ8IZT9 166 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 CLYBLQ8N0X4 340 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 TMEM132CQ8N3T6 1108 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 OR52B6Q8NGF0 335 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 DAZLQ92904 295 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ART5Q96L15 291 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 F2RL3Q96RI0 385 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 SOX17Q9H6I2 414 aaPredicted RBP9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 AKIRIN1Q9H9L7 192 aaPredicted RBP9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 ZBTB26Q9HCK0 441 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 GPR83Q9NYM4 423 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 EMCNQ9ULC0 261 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 KMT2BQ9UMN6 2715 aaPredicted RBP9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 TMED5Q9Y3A6 229 aa9.69□□□□□ -0.86
TRAFD1-208ENST00000552890 HMGB1P1B2RPK0 211 aaPredicted RBP9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 MANBAO00462 879 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 DPM1O60762 260 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SERPINE1P05121 402 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SERPINA7P05543 415 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 BPGMP07738 259 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 CTSBP07858 339 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 UMODP07911 640 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 CPN2P22792 545 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 MAPK1P28482 360 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 ALDH3A1P30838 453 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 HNRNPH1P31943 449 aaKnown RBP9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SERPINB4P48594 390 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 PGDP52209 483 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 HK2P52789 917 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 CDH13P55290 713 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 POLE2P56282 527 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 RPS13P62277 151 aaKnown RBP9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC13A2Q13183 592 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 MYBPC3Q14896 1274 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 HEPACAMQ14CZ8 416 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 HSP90B2PQ58FF3 399 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 VWA2Q5GFL6 755 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 AGAP7PQ5VUJ5 663 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 LCN10Q6JVE6 187 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 CPEB2Q7Z5Q1 589 aaKnown RBP9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 EXOC3L1Q86VI1 746 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 C10orf107Q8IVU9 208 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 GALNT16Q8N428 558 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 METTL27Q8N6F8 245 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms