RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 FADDQ13158 208 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 LRRC32Q14392 662 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 MYBPC3Q14896 1274 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 ADPRMQ3LIE5 342 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
RAB5C-208ENST00000551338 IQCCQ4KMZ1 466 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 PRRT3Q5FWE3 981 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 KIAA1614Q5VZ46 1190 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 KIAA0895LQ68EN5 471 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 OR4C11Q6IEV9 310 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 SLC30A9Q6PML9 568 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 SPESP1Q6UW49 350 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 CHRDL2Q6WN34 429 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 VTCN1Q7Z7D3 282 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 PAQR7Q86WK9 346 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 OFCC1Q8IZS5 231 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 TRIML2Q8N7C3 387 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 MFSD9Q8NBP5 474 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 C11orf65Q8NCR3 313 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 FLCNQ8NFG4 579 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 TTLQ8NG68 377 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 OR5AK3PQ8NH89 298 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 FLVCR1-AS1Q8TAF5 88 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 MAL2Q969L2 176 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 SDCCAG3Q96C92 435 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 RMND5BQ96G75 393 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-208ENST00000551338 MBOAT4Q96T53 435 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 DPH7Q9BTV6 452 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 GABARAPL1Q9H0R8 117 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 EPB41L1Q9H4G0 881 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 RAD21L1Q9H4I0 556 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 KLHL31Q9H511 634 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 C6orf106Q9H6K1 298 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-208ENST00000551338 UBE2ZQ9H832 354 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-208ENST00000551338 SMURF2Q9HAU4 748 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 SLC2A4RGQ9NR83 387 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 C1GALT1Q9NS00 363 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 SIRT3Q9NTG7 399 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-208ENST00000551338 RAPGEFL1Q9UHV5 662 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 FAF1Q9UNN5 650 aaPredicted RBP10.96□□□□□ -0.65
RAB5C-208ENST00000551338 MYRFQ9Y2G1 1151 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 HS3ST3A1Q9Y663 406 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 AP1M2Q9Y6Q5 423 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 COLEC10Q9Y6Z7 277 aa10.96□□□□□ -0.65
RAB5C-208ENST00000551338 CEP290O15078 2479 aa10.96□□□□□ -0.66
RAB5C-208ENST00000551338 SCN2AQ99250 2005 aa10.96□□□□□ -0.66
RAB5C-208ENST00000551338 TRANK1O15050 2925 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 LRIT2A6NDA9 550 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 ISM1B1AKI9 464 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 G3V2T6 193 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 hCG_2039718K7EN88 272 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 BTN3A3O00478 584 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 NOBOXO60393 691 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 FABP3P05413 133 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 SERPIND1P05546 499 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 SRFP11831 508 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 F3P13726 295 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 CRATP43155 626 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 SSR2P43308 183 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 ALDH9A1P49189 494 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 CDK9P50750 372 aaKnown RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 CCR5P51681 352 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 CASP9P55211 416 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 ITGA1P56199 1179 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 BIRC2Q13490 618 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 HEPACAMQ14CZ8 416 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 TEAD4Q15561 434 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 SLC5A12Q1EHB4 618 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 ZIK1Q3SY52 487 aaPredicted RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 NADK2Q4G0N4 442 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 KCTD21Q4G0X4 260 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 TMEM35AQ53FP2 167 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 TOR1AIP1Q5JTV8 583 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 SAXO2Q658L1 398 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 OR2T5Q6IEZ7 315 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 MRM1Q6IN84 353 aaKnown RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 FAM180BQ6P0A1 224 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 ANGPTL8Q6UXH0 198 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 PIWIL3Q7Z3Z3 882 aaKnown RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 ABI3BPQ7Z7G0 1075 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 PATL1Q86TB9 770 aaKnown RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 SATL1Q86VE3 508 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 AMIGO1Q86WK6 493 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 RNF130Q86XS8 419 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 ZDHHC13Q8IUH4 622 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 NATD1Q8N6N6 113 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 OR13H1Q8NG92 308 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 OR2T29Q8NH02 315 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 NFKBIDQ8NI38 313 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 LCN9Q8WX39 176 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 OR5P2Q8WZ92 322 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 UCN3Q969E3 161 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 MS4A6EQ96DS6 147 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 RDH12Q96NR8 316 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 PHF7Q9BWX1 381 aaPredicted RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 YIPF3Q9GZM5 350 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 TMEM38AQ9H6F2 299 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 TM9SF3Q9HD45 589 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms