RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.73■□□□□ 0.591e-7■■■■■ 48
SSH1-209ENST00000551165 TMEM26Q6ZUK4 368 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 ICA1LQ8NDH6 482 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 REXO5Q96IC2 774 aaKnown RBP18.73■□□□□ 0.59
SSH1-209ENST00000551165 RNF145Q96MT1 663 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 CIB1Q99828 191 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 VPS13AQ96RL7 3174 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 LOC105369274A0A096LPK9 316 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 LOC102723532A0A0G2JNH3 316 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 A0A1W2PRB8 838 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 P2RX6O15547 441 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 PEX1O43933 1283 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 CREG1O75629 220 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 FRMPD2BQ6IN97 320 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 FIGLAQ6QHK4 219 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 ZZZ3Q8IYH5 903 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 OR4N4Q8N0Y3 316 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 MAL2Q969L2 176 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 NCLNQ969V3 563 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 EXOSC8Q96B26 276 aaKnown RBP18.73■□□□□ 0.59
SSH1-209ENST00000551165 MTERF3Q96E29 417 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 OR2A5Q96R48 311 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 SLC29A1Q99808 456 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 EFHD1Q9BUP0 239 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 COQ10BQ9H8M1 238 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 AGPAT4Q9NRZ5 378 aa18.73■□□□□ 0.59
SSH1-209ENST00000551165 OR5K4A6NMS3 321 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 ZCCHC18P0CG32 403 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 CERS1P27544 350 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 MVDP53602 400 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 SLAMF1Q13291 335 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 TMEM35AQ53FP2 167 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 SPESP1Q6UW49 350 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 SERPINA11Q86U17 422 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.72■□□□□ 0.59
SSH1-209ENST00000551165 SHISA5Q8N114 240 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 ACOT4Q8N9L9 421 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 GOLM1Q8NBJ4 401 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 PAPD5Q8NDF8 572 aaKnown RBP18.72■□□□□ 0.59
SSH1-209ENST00000551165 OR2L5Q8NG80 312 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 GOT1L1Q8NHS2 421 aaPredicted RBP18.72■□□□□ 0.59
SSH1-209ENST00000551165 FAM162AQ96A26 154 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 CHID1Q9BWS9 393 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 CHST8Q9H2A9 424 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 VPS4AQ9UN37 437 aa18.72■□□□□ 0.59
SSH1-209ENST00000551165 HNRNPRO43390 633 aaKnown RBP18.71■□□□□ 0.59
SSH1-209ENST00000551165 TNFSF14O43557 240 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 FAM58BPP0C7Q3 252 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 ZNF26P17031 533 aaPredicted RBP18.71■□□□□ 0.59
SSH1-209ENST00000551165 HIST1H1TP22492 207 aaPredicted RBP18.71■□□□□ 0.59
SSH1-209ENST00000551165 ATP5A1P25705 553 aaKnown RBP18.71■□□□□ 0.59
SSH1-209ENST00000551165 NRF1Q16656 503 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 NDUFAF5Q5TEU4 345 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 DCP2Q8IU60 420 aaKnown RBP18.71■□□□□ 0.59
SSH1-209ENST00000551165 ADCY4Q8NFM4 1077 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 FAM174AQ8TBP5 190 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 ZFPM2Q8WW38 1151 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 EME1Q96AY2 570 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 QRFPRQ96P65 431 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 ADAM29Q9UKF5 820 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 ATG4BQ9Y4P1 393 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 SAC3D1A6NKF1 404 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 HCRTR1O43613 425 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 PRKD3O94806 890 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 SERPINA1P01009 418 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 PTGER1P34995 402 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 RPL3P39023 403 aaKnown RBP18.71■□□□□ 0.59
SSH1-209ENST00000551165 HEPACAMQ14CZ8 416 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 RGNQ15493 299 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 SWT1Q5T5J6 900 aaKnown RBP18.71■□□□□ 0.59
SSH1-209ENST00000551165 IRAK1BP1Q5VVH5 260 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 ANGPTL8Q6UXH0 198 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 TMEM126BQ8IUX1 230 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 SLC35A5Q9BS91 424 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 CXorf36Q9H7Y0 433 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 UCKL1Q9NWZ5 548 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 TAS2R9Q9NYW1 312 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 DLGAP2Q9P1A6 1054 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 RAPGEFL1Q9UHV5 662 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 PILRAQ9UKJ1 303 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 AP3M1Q9Y2T2 418 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 ASB4Q9Y574 426 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 DMDP11532 3685 aa18.71■□□□□ 0.59
SSH1-209ENST00000551165 C2orf74A8MZ97 194 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 DNAJB6O75190 326 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 GMNNO75496 209 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 SCELO95171 688 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 NXPH1P58417 271 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 RPS15AP62244 130 aaKnown RBP18.7■□□□□ 0.58
SSH1-209ENST00000551165 DEFB133Q30KQ1 61 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 C18orf63Q68DL7 685 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 EPHX4Q8IUS5 362 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 TBC1D19Q8N5T2 526 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 SPACA7Q96KW9 195 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 KCNC2Q96PR1 638 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 PCED1AQ9H1Q7 454 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 VCX3BQ9H321 246 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 FBXW2Q9UKT8 454 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 PCDHGB4Q9UN71 923 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 A0A0C4DFX4 3053 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms