RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 SOX11P35716 441 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 SNRPNP63162 240 aaKnown RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 ZNF33BQ06732 778 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 SLC13A2Q13183 592 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 DDX39BQ13838 428 aaKnown RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 TERF2Q15554 542 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 INAQ16352 499 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 PLEKHN1Q494U1 663 aaPredicted RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 UBAP2Q5T6F2 1119 aaKnown RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 KHDRBS2Q5VWX1 349 aaKnown RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 GOLGA7Q7Z5G4 137 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 PLD6Q8N2A8 252 aaKnown RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 UBLCP1Q8WVY7 318 aaPredicted RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 RGMAQ96B86 450 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 PHF21BQ96EK2 531 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 F2RL3Q96RI0 385 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 MS4A8Q9BY19 250 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.52□□□□□ -0.41
CEP290-205ENST00000550962 LYRM4Q9HD34 91 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 PRTFDC1Q9NRG1 225 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 MS4A12Q9NXJ0 267 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 LUZP4Q9P127 313 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 PLAAQ9Y263 795 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 ASB1Q9Y576 335 aa12.52□□□□□ -0.41
CEP290-205ENST00000550962 COPG1Q9Y678 874 aaKnown RBP12.52□□□□□ -0.41
CEP290-205ENST00000550962 TNRC6AQ8NDV7 1962 aaKnown RBP12.51□□□□□ -0.41
CEP290-205ENST00000550962 IGHV3-20A0A0C4DH32 117 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 A0A0G2JN53 185 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 TCRBV16S1A1N1A0A5B0 115 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 SAGE2PA6NJ88 616 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 A8MUI8 341 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 E2F3O00716 465 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 OTCP00480 354 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 GSTA1P08263 222 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 ITGAMP11215 1152 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 PTX3P26022 381 aaPredicted RBP12.51□□□□□ -0.41
CEP290-205ENST00000550962 TLX1P31314 330 aaPredicted RBP12.51□□□□□ -0.41
CEP290-205ENST00000550962 SLC26A5P58743 744 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 ELOAQ14241 798 aaKnown RBP12.51□□□□□ -0.41
CEP290-205ENST00000550962 IGFBP7Q16270 282 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 MEP1AQ16819 746 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 TTC19Q6DKK2 380 aaPredicted RBP12.51□□□□□ -0.41
CEP290-205ENST00000550962 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 LGI4Q8N135 537 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 HORMAD2Q8N7B1 307 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 L3MBTL4Q8NA19 623 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 Q8NA96 180 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 HUS1BQ8NHY5 278 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 HAS2Q92819 552 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 TSLPQ969D9 159 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 QRFPRQ96P65 431 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 MESP1Q9BRJ9 268 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 NOL11Q9H8H0 719 aaKnown RBP12.51□□□□□ -0.41
CEP290-205ENST00000550962 STMN3Q9NZ72 180 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 PHF11Q9UIL8 331 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 DAPP1Q9UN19 280 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 STK38LQ9Y2H1 464 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 PCDHGA10Q9Y5H3 936 aa12.51□□□□□ -0.41
CEP290-205ENST00000550962 OR5H15A6NDH6 313 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 DYRK3O43781 588 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 PRAMEF4O60810 478 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 SIX3O95343 332 aaPredicted RBP12.5□□□□□ -0.41
CEP290-205ENST00000550962 TGFB1P01137 390 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 FAM153BP0C7A2 387 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 MAOAP21397 527 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 HIST1H1TP22492 207 aaPredicted RBP12.5□□□□□ -0.41
CEP290-205ENST00000550962 CERS1P27544 350 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 PPP2R1BP30154 601 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 LIM2P55344 173 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 STX4Q12846 297 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 IFT88Q13099 833 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 BIKQ13323 160 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 RUNX2Q13950 521 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 SERTAD2Q14140 314 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 CPSF6Q16630 551 aaKnown RBP eCLIP12.5□□□□□ -0.41
CEP290-205ENST00000550962 FAM153CQ494X1 144 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 DEPDC1Q5TB30 811 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 PRAMEF9Q5VWM5 478 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 OR4C11Q6IEV9 310 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 RPUSD3Q6P087 351 aaKnown RBP12.5□□□□□ -0.41
CEP290-205ENST00000550962 FAM180AQ6UWF9 173 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 CUZD1Q86UP6 607 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 SLC22A9Q8IVM8 553 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 FAM47BQ8NA70 645 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 OR1N1Q8NGS0 311 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 PSMF1Q92530 271 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 CCDC126Q96EE4 140 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 NTMT1Q9BV86 223 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 TXLNGYQ9BZA5 131 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 ZBTB20Q9HC78 741 aaPredicted RBP12.5□□□□□ -0.41
CEP290-205ENST00000550962 ADAP2Q9NPF8 381 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 DMRT3Q9NQL9 472 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 ZNF358Q9NW07 568 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 PSD3Q9NYI0 1048 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 AHSPQ9NZD4 102 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 DCDC2Q9UHG0 476 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
CEP290-205ENST00000550962 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms