RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 BRINP2Q9C0B6 783 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 REXO4Q9GZR2 422 aaKnown RBP11.49□□□□□ -0.57
ERBB3-216ENST00000550869 KLHL31Q9H511 634 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 DDX31Q9H8H2 851 aaKnown RBP11.49□□□□□ -0.57
ERBB3-216ENST00000550869 PRDM7Q9NQW5 492 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 SDR39U1Q9NRG7 319 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-216ENST00000550869 AIG1Q9NVV5 245 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 TMEM45AQ9NWC5 275 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 AHSPQ9NZD4 102 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 ADAM29Q9UKF5 820 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 TRIM33Q9UPN9 1127 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 SDK2Q58EX2 2172 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 COL12A1Q99715 3063 aa11.49□□□□□ -0.57
ERBB3-216ENST00000550869 CAPN14A8MX76 684 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 FCHO1O14526 889 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 TXNDC9O14530 226 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 SLC22A2O15244 555 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 NDUFS4O43181 175 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 RRP9O43818 475 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 SEC22BO75396 215 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 RASSF9O75901 435 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 DCTN3O75935 186 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 FOLR1P15328 257 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 TSFMP43897 325 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 DIO3P55073 304 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 STXBP1P61764 594 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 SNRPNP63162 240 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 RGS1Q08116 209 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 MAD2L1Q13257 205 aaPredicted RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 TBR1Q16650 682 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 TCTE1Q5JU00 501 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 IL23RQ5VWK5 629 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 NXNQ6DKJ4 435 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 NOXRED1Q6NXP6 359 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 ABHD17CQ6PCB6 329 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 CLNKQ7Z7G1 428 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 VASH2Q86V25 355 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 FITM2Q8N6M3 262 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 FNDC5Q8NAU1 212 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 KCT2Q8NC54 265 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 SRFBP1Q8NEF9 429 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 UTP15Q8TED0 518 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 GAL3ST3Q96A11 431 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 RERGQ96A58 199 aaPredicted RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 RGMAQ96B86 450 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 CCDC74BQ96LY2 380 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 QRFPRQ96P65 431 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 LRRC37BQ96QE4 947 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 CCDC106Q9BWC9 280 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 ADNPQ9H2P0 1102 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 MRGBPQ9NV56 204 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 SIDT1Q9NXL6 827 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 NOP53Q9NZM5 478 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 KLHL3Q9UH77 587 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 IL17BQ9UHF5 180 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 RUVBL1Q9Y265 456 aaKnown RBP11.48□□□□□ -0.57
ERBB3-216ENST00000550869 SLC22A7Q9Y694 548 aa11.48□□□□□ -0.57
ERBB3-216ENST00000550869 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 SCN3AQ9NY46 2000 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 B4E171 279 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 C4orf51C9J302 202 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 TERTO14746 1132 aaKnown RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 SUV39H1O43463 412 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 CTSBP07858 339 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 SLC35G6P0C7Q6 338 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 FAM87AP0C7U9 286 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 PRPS2P11908 318 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 BCKDHAP12694 445 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 IDO1P14902 403 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 SDC1P18827 310 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 GPX3P22352 226 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 TPP2P29144 1249 aaPredicted RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 TIA1P31483 386 aaKnown RBP eCLIP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 CSTF2P33240 577 aaKnown RBP eCLIP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 TSPAN7P41732 249 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 C21orf58P58505 322 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 RAB15P59190 212 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 RPL38P63173 70 aaKnown RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 ACSM2AQ08AH3 577 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 SRSF6Q13247 344 aaKnown RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 SQLEQ14534 574 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 HKDC1Q2TB90 917 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 GALNTL6Q49A17 601 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 TOR1AIP1Q5JTV8 583 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 WASHC2DQ5SRD0 308 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 GARNL3Q5VVW2 1013 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 ACSM2BQ68CK6 577 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 OR4C11Q6IEV9 310 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 MRM1Q6IN84 353 aaKnown RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 ZNF793Q6ZN11 406 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 TRPM8Q7Z2W7 1104 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 COMMD6Q7Z4G1 85 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 ZCCHC7Q8N3Z6 543 aaKnown RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 C1orf52Q8N6N3 182 aaKnown RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 ZNF655Q8N720 491 aaPredicted RBP11.47□□□□□ -0.57
ERBB3-216ENST00000550869 CSNK1A1LQ8N752 337 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 CATSPER2Q96P56 530 aa11.47□□□□□ -0.57
ERBB3-216ENST00000550869 TEFMQ96QE5 360 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms