RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SNUPNO95149 360 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 BMP10O95393 424 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 ALBP02768 609 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 GBAP04062 536 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 KLK1P06870 262 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 PRPH2P23942 346 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 SSR2P43308 183 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 RAP1GDS1P52306 607 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 MTTPP55157 894 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 LIM2P55344 173 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 HNRNPH2P55795 449 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 RPS18P62269 152 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 TGM3Q08188 693 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 NCF4Q15080 339 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 AP5B1Q2VPB7 878 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 XKR7Q5GH72 579 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 COMMD6Q7Z4G1 85 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 PROSER1Q86XN7 944 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 WDR75Q8IWA0 830 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 ZC3H7AQ8IWR0 971 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 ZCCHC7Q8N3Z6 543 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 C1orf52Q8N6N3 182 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 TMEM52Q8NDY8 209 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 STT3BQ8TCJ2 826 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 UCN3Q969E3 161 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 FKBP10Q96AY3 582 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 PEX11GQ96HA9 241 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 FAR2Q96K12 515 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 SPSB2Q99619 263 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 NPLQ9BXD5 320 aaPredicted RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 DPH1Q9BZG8 443 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 TGIF2Q9GZN2 237 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 CLK4Q9HAZ1 481 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 LANCL2Q9NS86 450 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 TRPC4Q9UBN4 977 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 GIMAP2Q9UG22 337 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 DAPP1Q9UN19 280 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 FARSAQ9Y285 508 aaKnown RBP12.32□□□□□ -0.44
RAB5C-206ENST00000550406 ASB4Q9Y574 426 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 PCDHGA6Q9Y5G7 932 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 APC2O95996 2303 aa12.32□□□□□ -0.44
RAB5C-206ENST00000550406 CYR61O00622 381 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 B3GALT2O43825 422 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 RSL1D1O76021 490 aaKnown RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 RECKO95980 971 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 UMODP07911 640 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 ZGLP1P0C6A0 271 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 KITP10721 976 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 PIM1P11309 404 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 MDH1P40925 334 aaKnown RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 TSFMP43897 325 aaKnown RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 XCR1P46094 333 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 HNRNPFP52597 415 aaKnown RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 FOXK2Q01167 660 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 SLAMF1Q13291 335 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 PDCD2Q16342 344 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 RIPOR1Q6ZS17 1223 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 SHISA6Q6ZSJ9 500 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 MED25Q71SY5 747 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 MAVSQ7Z434 540 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 SPACA3Q8IXA5 215 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 DDIASQ8IXT1 998 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 FAM76AQ8TAV0 307 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 ZCCHC14Q8WYQ9 949 aaKnown RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 C7orf26Q96N11 449 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 CSF3RQ99062 836 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 YIPF2Q9BWQ6 316 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 GPR87Q9BY21 358 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 MKKSQ9NPJ1 570 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 SIRT5Q9NXA8 310 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 AHSPQ9NZD4 102 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 ZNF282Q9UDV7 671 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 MARCOQ9UEW3 520 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-206ENST00000550406 ADAM29Q9UKF5 820 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 TCFL5Q9UL49 500 aa12.31□□□□□ -0.44
RAB5C-206ENST00000550406 ZFHX4Q86UP3 3567 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 FREM2Q5SZK8 3169 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 ATP6AP2A0A1C7CYW4 349 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 TCP11X1B4DZS4 312 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 C21orf140B9A014 251 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 C9J4A7 227 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 SDHDO14521 159 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 LSM1O15116 133 aaKnown RBP12.3□□□□□ -0.44
RAB5C-206ENST00000550406 KLK10O43240 276 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 ATP6AP2O75787 350 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 CHEK2O96017 543 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 ITPKBP27987 946 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 PTPN4P29074 926 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 GYS2P54840 703 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 RAB38P57729 211 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 KLC1Q07866 573 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 RFTN2Q52LD8 501 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-206ENST00000550406 SPDYAQ5MJ70 313 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 VWA5B1Q5TIE3 1220 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 C18orf63Q68DL7 685 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 NIPAL1Q6NVV3 410 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 NUDT13Q86X67 352 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 PRSS58Q8IYP2 241 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 TM4SF18Q96CE8 201 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms