RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 MAPKAPK3Q16644 382 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 CATSPEREQ5SY80 951 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 HECTD2Q5U5R9 776 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 FAM45BPQ6NSW5 357 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 SBSNQ6UWP8 590 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 CHERPQ8IWX8 916 aaKnown RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 KIF2BQ8N4N8 673 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 GPATCH11Q8N954 259 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 TRPV3Q8NET8 790 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 FAM45AQ8TCE6 357 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 ACTRT1Q8TDG2 376 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 UTP15Q8TED0 518 aaKnown RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 SLC5A11Q8WWX8 675 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 ANKRD7Q92527 254 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 SLCO2A1Q92959 643 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 NEIL2Q969S2 332 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 TMEM125Q96AQ2 219 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 C14orf79Q96F83 325 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 PDLIM5Q96HC4 596 aaKnown RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 PTCHD1Q96NR3 888 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 VKORC1Q9BQB6 163 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 AIF1LQ9BQI0 150 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 TSPAN10Q9H1Z9 355 aaPredicted RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 PELI2Q9HAT8 420 aa7.13□□□□□ -1.27
NEK3-201ENST00000550331 KLF13Q9Y2Y9 288 aaPredicted RBP7.13□□□□□ -1.27
NEK3-201ENST00000550331 KLRC4-KLRK1H3BQV0 150 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 PSMD12O00232 456 aaPredicted RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 DNALI1O14645 258 aaPredicted RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 DNAJB6O75190 326 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 GUCA1CO95843 209 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 SERPIND1P05546 499 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 SERPINA6P08185 405 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 SMIM10L1P0DMW3 83 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 RNH1P13489 461 aaKnown RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 CD1EP15812 388 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 GSTM2P28161 218 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 MSX1P28360 303 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 HNMTP50135 292 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 ST13P50502 369 aaKnown RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 ITGA8P53708 1063 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 OLR1P78380 273 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 BTG2P78543 158 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 CDKL1Q00532 357 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 REEP5Q00765 189 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 HYAL2Q12891 473 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 CDSNQ15517 529 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 TERF2Q15554 542 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 PPP1R3AQ16821 1122 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 BBS9Q3SYG4 887 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 TEDDM1Q5T9Z0 273 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 ZNF468Q5VIY5 522 aaPredicted RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 TMPRSS11BQ86T26 416 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 ZNF227Q86WZ6 799 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 DOLPP1Q86YN1 238 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 MMP21Q8N119 569 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 CPSF7Q8N684 471 aaKnown RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 ANKRD53Q8N9V6 530 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 ACBD4Q8NC06 268 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 APCDD1LQ8NCL9 501 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 NFAM1Q8NET5 270 aaPredicted RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 B3GNT7Q8NFL0 401 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 C16orf52Q8NHV5 167 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 AGAP11Q8TF27 550 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 CHTF18Q8WVB6 975 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 SMIM10Q96HG1 83 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 TSNARE1Q96NA8 513 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 DMRTA2Q96SC8 542 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 OSBPL9Q96SU4 736 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 DEFB126Q9BYW3 111 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 SPNS1Q9H2V7 528 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 PPANQ9NQ55 473 aaKnown RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 ASIC3Q9UHC3 531 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 PPIEQ9UNP9 301 aaKnown RBP7.12□□□□□ -1.27
NEK3-201ENST00000550331 VWA7Q9Y334 891 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 MMACHCQ9Y4U1 282 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 ASB1Q9Y576 335 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 KCNE2Q9Y6J6 123 aa7.12□□□□□ -1.27
NEK3-201ENST00000550331 ACANP16112 2415 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 CTAGE15A4D2H0 777 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 SYNDIG1LA6NDD5 238 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 C19orf84I3L1E1 186 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 ADAM10O14672 748 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 TFECO14948 347 aaPredicted RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 BANF1O75531 89 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 B3GALT4O96024 378 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 ZNF37AP17032 561 aaPredicted RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 GNAZP19086 355 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 TFEBP19484 476 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 MAOAP21397 527 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 PTGS2P35354 604 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 KIR3DL1P43629 444 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 CLCN2P51788 898 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 RAB8AP61006 207 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 STXBP1P61764 594 aaKnown RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 HSF1Q00613 529 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 TLE4Q04727 773 aa7.11□□□□□ -1.27
NEK3-201ENST00000550331 FRG1Q14331 258 aaKnown RBP7.11□□□□□ -1.27
NEK3-201ENST00000550331 MORF4L2Q15014 288 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms