RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PSMF1Q92530 271 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 TBC1D20Q96BZ9 403 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 IMMP1LQ96LU5 166 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 MAPKAP1Q9BPZ7 522 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 MECRQ9BV79 373 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 NTMT1Q9BV86 223 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 TMEM109Q9BVC6 243 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 ERVK-6Q9BXR3 956 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 SLC25A18Q9H1K4 315 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 ZNF552Q9H707 407 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 C14orf105Q9NVL8 296 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 LUZP4Q9P127 313 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 TNPO3Q9Y5L0 923 aaKnown RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 IGKV3D-11A0A0A0MRZ8 115 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 A0A1W2PQ72 361 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 A0A1W2PS29 197 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 CYR61O00622 381 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 PRPF4O43172 522 aaKnown RBP eCLIP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 TMPRSS11DO60235 418 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 MAN1A2O60476 641 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 GLRA3O75311 464 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 SUPT7LO94864 414 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 ACPPP15309 386 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 IMPDH1P20839 514 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 ATP5A1P25705 553 aaKnown RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 BSGP35613 385 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 CCNG1P51959 295 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 LIM2P55344 173 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 HNRNPH2P55795 449 aaKnown RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 STXBP1P61764 594 aaKnown RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 CLCQ05315 142 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 LAPTM5Q13571 262 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 MPP2Q14168 576 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 TUBB8Q3ZCM7 444 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 NADK2Q4G0N4 442 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 PAGE2BQ5JRK9 111 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 DEPDC1Q5TB30 811 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 KHDRBS2Q5VWX1 349 aaKnown RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 B3GNTL1Q67FW5 361 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 SCIMPQ6UWF3 145 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 MED25Q71SY5 747 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 MMP21Q8N119 569 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 GALNT16Q8N428 558 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 ACOT4Q8N9L9 421 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 TMEM102Q8N9M5 508 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 LSM14AQ8ND56 463 aaKnown RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 ARMC2Q8NEN0 867 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 L3HYPDHQ96EM0 354 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 NPAS2Q99743 824 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 SLC25A23Q9BV35 468 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 SHCBP1LQ9BZQ2 653 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 PITHD1Q9GZP4 211 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-208ENST00000550283 ZNF700Q9H0M5 742 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 ADNPQ9H2P0 1102 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 MED4Q9NPJ6 270 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 DCDC2Q9UHG0 476 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
RAB5B-208ENST00000550283 A8MUA0 341 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 H3BQF6 201 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 PEX12O00623 359 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 COPEO14579 308 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 HPP00738 406 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 PDYNP01213 254 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 C8orf89P0DMQ9 161 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 ITGAMP11215 1152 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 RNH1P13489 461 aaKnown RBP10.53□□□□□ -0.72
RAB5B-208ENST00000550283 NAGLUP54802 743 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 ID2Q02363 134 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 IFFO1Q0D2I5 559 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 ABRAXAS2Q15018 415 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 HIST2H2ACQ16777 129 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-208ENST00000550283 KRT71Q3SY84 523 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 LACTB2Q53H82 288 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-208ENST00000550283 SFT2D3Q587I9 215 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 TNFAIP8L3Q5GJ75 292 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 FRG2Q64ET8 278 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 HIST2H2AA3Q6FI13 130 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 TCTN3Q6NUS6 607 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 METTL2BQ6P1Q9 378 aaKnown RBP10.53□□□□□ -0.72
RAB5B-208ENST00000550283 ASB18Q6ZVZ8 466 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 MILR1Q7Z6M3 343 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 CLNKQ7Z7G1 428 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 EXOC3L1Q86VI1 746 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 LCA5Q86VQ0 697 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 C10orf107Q8IVU9 208 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 SCUBE1Q8IWY4 988 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 KIF2BQ8N4N8 673 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 CCNYL1Q8N7R7 359 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 RBMXL3Q8N7X1 1067 aaKnown RBP10.53□□□□□ -0.72
RAB5B-208ENST00000550283 CDYL2Q8N8U2 506 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 Q8NA96 180 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 PLPP5Q8NEB5 264 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 TTLQ8NG68 377 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 DOK4Q8TEW6 326 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 ATP6V1E2Q96A05 226 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 APOPT1Q96IL0 206 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 THOC3Q96J01 351 aaKnown RBP10.53□□□□□ -0.72
RAB5B-208ENST00000550283 FAM111AQ96PZ2 611 aa10.53□□□□□ -0.72
RAB5B-208ENST00000550283 FRG2BQ96QU4 278 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms