RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 DAZLQ92904 295 aaKnown RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 VMP1Q96GC9 406 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 MAGED4Q96JG8 741 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SIGLEC12Q96PQ1 595 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 KCNC2Q96PR1 638 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 NPAS2Q99743 824 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCDC77Q9BR77 488 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 COPS7BQ9H9Q2 264 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 CAB39LQ9H9S4 337 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 KLHL1Q9NR64 748 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 PRTFDC1Q9NRG1 225 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 SMYD2Q9NRG4 433 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 RYDENQ9NUL5 291 aaKnown RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 ANKRD10Q9NXR5 420 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 ADGRE2Q9UHX3 823 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 PTBP2Q9UKA9 531 aaKnown RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 RNF112Q9ULX5 631 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 KLF13Q9Y2Y9 288 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 CREBBPQ92793 2442 aa10.18□□□□□ -0.78
VTI1BP3-201ENST00000550220 ENO4A6NNW6 628 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 SYCE1LA8MT33 242 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 CXorf49A8MYA2 514 aaPredicted RBP10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 NPIPA5E9PKD4 350 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 FAM227AF5H4B4 570 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 PHGDHO43175 533 aaKnown RBP10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 ASNA1O43681 348 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 NME2P1O60361 137 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 CTNSO60931 367 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZFAND5O76080 213 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 B3GALT4O96024 378 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 NME2P22392 152 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 COL8A1P27658 744 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 TPP2P29144 1249 aaPredicted RBP10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 CASP2P42575 452 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 MAGEA4P43358 317 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 HSPA7P48741 367 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 PLA2G16P53816 162 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 IRF8Q02556 426 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 PCDH1Q08174 1060 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 RUNX2Q13950 521 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 SERTAD2Q14140 314 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 DOC2AQ14183 400 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 NAA30Q147X3 362 aaPredicted RBP10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF787Q6DD87 383 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 ABHD17CQ6PCB6 329 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 CHSY3Q70JA7 882 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 GALNTL5Q7Z4T8 443 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 MRGPRGQ86SM5 289 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZGRF1Q86YA3 2104 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 SPPL2CQ8IUH8 684 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 SCUBE1Q8IWY4 988 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 SHISA5Q8N114 240 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 GHDCQ8N2G8 530 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 SPATA6LQ8N4H0 392 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 TMEM156Q8N614 296 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 PPM1NQ8N819 430 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 FRMD6Q96NE9 622 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 CENPKQ9BS16 269 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 TMEM79Q9BSE2 394 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 TBCDQ9BTW9 1192 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 CD244Q9BZW8 370 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 TSPYL1Q9H0U9 437 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 LYRM4Q9HD34 91 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 ADAP2Q9NPF8 381 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 NECTIN3Q9NQS3 549 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 GRHL1Q9NZI5 618 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 NUDT4Q9NZJ9 180 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 NPIPA1Q9UND3 350 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 YARS2Q9Y2Z4 477 aaKnown RBP10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 CLCA3PQ9Y6N3 262 aa10.17□□□□□ -0.78
VTI1BP3-201ENST00000550220 A0A087X1B8 175 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 CTAGE15A4D2H0 777 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 A8MUA0 341 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 PRSS44E7EML9 344 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 MAN1A2O60476 641 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCNT2O60583 730 aaKnown RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 MYO1DO94832 1006 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 LTA4HP09960 611 aaKnown RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF24P17028 368 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 TFEBP19484 476 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 HNRNPH1P31943 449 aaKnown RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ARFIP1P53367 373 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 GPX6P59796 221 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 MRPS25P82663 173 aaKnown RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 CKAP4Q07065 602 aaKnown RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 STX4Q12846 297 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 CHIT1Q13231 466 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 E2F2Q14209 437 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ELAVL1Q15717 326 aaKnown RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 FAM83EQ2M2I3 478 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 AP5B1Q2VPB7 878 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 C18orf21Q32NC0 220 aaPredicted RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 KBTBD12Q3ZCT8 623 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 Q6ZPB1 254 aaPredicted RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ISCA2Q86U28 154 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 CTAGE6Q86UF2 777 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 TICAM1Q8IUC6 712 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 KIF2BQ8N4N8 673 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 APCDD1LQ8NCL9 501 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms