RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	SLC30A4	O14863	429 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	EED	O75530	441 aa	Known RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	NSA2	O95478	260 aa	Known RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	MT-CO3	P00414	261 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	IL6	P05231	212 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	FAM58BP	P0C7Q3	252 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	FTH1P19	P0C7X4	201 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	SMIM10L1	P0DMW3	83 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	COX7A2	P14406	83 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	SDHB	P21912	280 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	TACR1	P25103	407 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	CERS1	P27544	350 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	BUD31	P41223	144 aa	Predicted RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	C21orf58	P58505	322 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	TAS2R50	P59544	299 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	UFM1	P61960	85 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	SIM1	P81133	766 aa	Predicted RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	SRSF11	Q05519	484 aa	Known RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	KLC1	Q07866	573 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	STX5	Q13190	355 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	EIF3I	Q13347	325 aa	Known RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	PTGR1	Q14914	329 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	KRT72	Q14CN4	511 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	C16orf72	Q14CZ0	275 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	ISX	Q2M1V0	245 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	HES3	Q5TGS1	186 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	CDCP2	Q5VXM1	449 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	PRMT9	Q6P2P2	845 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	PAOX	Q6QHF9	649 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	DHRS13	Q6UX07	377 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	TMEM126B	Q8IUX1	230 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	RP9	Q8TA86	221 aa	Known RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	PROKR1	Q8TCW9	393 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	ADAMTS18	Q8TE60	1221 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	TESC	Q96BS2	214 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	MTERF3	Q96E29	417 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	LIN37	Q96GY3	246 aa	Predicted RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	SMIM10	Q96HG1	83 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	AICDA	Q9GZX7	198 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	LYRM4	Q9HD34	91 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	LHX9	Q9NQ69	397 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	SIDT1	Q9NXL6	827 aa	Known RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	TAGLN3	Q9UI15	199 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	CLCA2	Q9UQC9	943 aa		11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	MDC1	Q14676	2089 aa	Known RBP	11.02	□□□□□ -0.65
CNOT2-223	ENST00000550160	CCDC187	A0A096LP49	1063 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160		A0A0A6YYC8	382 aa	Predicted RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160		A0A1B0GX78	115 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	C1orf226	A1L170	272 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	CCDC154	A6NI56	674 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	CAPN14	A8MX76	684 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160		B4E171	279 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	C4orf51	C9J302	202 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160		H0YIG0	161 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160		I3L1I5	382 aa	Predicted RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ANKRD28	O15084	1053 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ANGPT2	O15123	496 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	SCAMP2	O15127	329 aa	Known RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	POLR1C	O15160	346 aa	Predicted RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	CFLAR	O15519	480 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ZNF749	O43361	778 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	AKAP10	O43572	662 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	TMPRSS11D	O60235	418 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	HNRNPCL1	O60812	293 aa	Known RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	CS	O75390	466 aa	Known RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ATP5H	O75947	161 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	SNRPB2	P08579	225 aa	Known RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	IL3	P08700	152 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	JMJD7	P0C870	316 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	NR2F6	P10588	404 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ESRRA	P11474	423 aa	Predicted RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	DRD2	P14416	443 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ALAS2	P22557	587 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	S100A3	P33764	101 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	TSPAN7	P41732	249 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	NOVA1	P51513	510 aa	Known RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	POLR2J	P52435	117 aa	Known RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	PDX1	P52945	283 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	RAB15	P59190	212 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	MC2R	Q01718	297 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	C2orf80	Q0P641	193 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	RCAN2	Q14206	197 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ZSCAN26	Q16670	478 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	MMEL1	Q495T6	779 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	C6orf89	Q6UWU4	347 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ZNF793	Q6ZN11	406 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	TTLL10	Q6ZVT0	673 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	DGLUCY	Q7Z3D6	616 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	GPR180	Q86V85	440 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	ARHGEF39	Q8N4T4	335 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	NATD1	Q8N6N6	113 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	OR9A4	Q8NGU2	314 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	PPCDC	Q96CD2	204 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	MMAB	Q96EY8	250 aa	Predicted RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	EGLN2	Q96KS0	407 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	C10orf90	Q96M02	699 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	REPIN1	Q9BWE0	567 aa	Known RBP	11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	CLMP	Q9H6B4	373 aa		11.01	□□□□□ -0.65
CNOT2-223	ENST00000550160	REEP4	Q9H6H4	257 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms