RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 SPNS1Q9H2V7 528 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ZNF160Q9HCG1 818 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 SLAMF7Q9NQ25 335 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PPANQ9NQ55 473 aaKnown RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ARL15Q9NXU5 204 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 GRHL1Q9NZI5 618 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 TRPC4Q9UBN4 977 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 NTNG1Q9Y2I2 539 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ESPL1Q14674 2120 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 FAM95CA0A1B0GW59 222 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 TRBC2A0A5B9 178 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CDC7O00311 574 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 MAP2K7O14733 419 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 PCDH17O14917 1159 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 VPS4BO75351 444 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 JRKO75564 520 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 PIAS1O75925 651 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 KLHL18O94889 574 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CELA2AP08217 269 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CYC1P08574 325 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 HIST1H2AGP0C0S8 130 aaPredicted RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 PRR35P0CG20 571 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 RNF224P0DH78 156 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 PF4V1P10720 104 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 HIST1H2ADP20671 130 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 TAS2R39P59534 338 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 GPX6P59796 221 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ETF1P62495 437 aaKnown RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CDKL1Q00532 357 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 MEF2AQ02078 507 aaPredicted RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 EEF1A2Q05639 463 aaKnown RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 MFAP5Q13361 173 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 NDUFA9Q16795 377 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CATSPEREQ5SY80 951 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 AGAP7PQ5VUJ5 663 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CAPN13Q6MZZ7 669 aaPredicted RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CYS1Q717R9 158 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ZNF572Q7Z3I7 529 aaPredicted RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ASPGQ86U10 573 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 PALM2Q8IXS6 379 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 KLHDC8AQ8IYD2 350 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ZBED8Q8IZ13 594 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 IQCKQ8N0W5 287 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ZADH2Q8N4Q0 377 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CISD2Q8N5K1 135 aaKnown RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ANKRD53Q8N9V6 530 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 CAMKVQ8NCB2 501 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ZNF740Q8NDX6 193 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 TM9SF4Q92544 642 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 NEIL2Q969S2 332 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 MOCOSQ96EN8 888 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 THOC3Q96J01 351 aaKnown RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 VPS39Q96JC1 886 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 HIST1H2AHQ96KK5 128 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 IMMP1LQ96LU5 166 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 LRGUKQ96M69 825 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 AGAP4Q96P64 663 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 LMF1Q96S06 567 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 HIST1H2AJQ99878 128 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 WDR77Q9BQA1 342 aaPredicted RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 HAUS8Q9BT25 410 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 H2AFJQ9BTM1 129 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 FAM129AQ9BZQ8 928 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 VN1R1Q9GZP7 353 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 AICDAQ9GZX7 198 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 RHOJQ9H4E5 214 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 POPDC3Q9HBV1 291 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 ASF1BQ9NVP2 202 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 WHRNQ9P202 907 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 SUCOQ9UBS9 1254 aaKnown RBP6.27□□□□□ -1.41
TMEM116-208ENST00000549537 VPS4AQ9UN37 437 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 SLC22A7Q9Y694 548 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 OTOGQ6ZRI0 2925 aa6.27□□□□□ -1.41
TMEM116-208ENST00000549537 F8P00451 2351 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 APCP25054 2843 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 MTORP42345 2549 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 NSG1A0A0A6YYJ2 146 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 TCRBV9S1A1TA0A576 114 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 NPEPPSL1A6NEC2 478 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 OR2W5A6NFC9 320 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 FAM159BA6NKW6 160 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 SGK494L7N484 410 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 E2F3O00716 465 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 NDC80O14777 642 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 EIF3HO15372 352 aaKnown RBP eCLIP6.26□□□□□ -1.41
TMEM116-208ENST00000549537 GALR3O60755 368 aaPredicted RBP6.26□□□□□ -1.41
TMEM116-208ENST00000549537 DNAJB6O75190 326 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 SEMA7AO75326 666 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 RDH16O75452 317 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
TMEM116-208ENST00000549537 CBX6O95503 412 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 GUCA1CO95843 209 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 SERPINA7P05543 415 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 HEXBP07686 556 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 ANXA5P08758 320 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 IL1RNP18510 177 aa6.26□□□□□ -1.41
TMEM116-208ENST00000549537 SSTR1P30872 391 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms