RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC5A11Q8WWX8 675 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM125Q96AQ2 219 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM120AQ9BXJ8 343 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 NRSN2Q9GZP1 204 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 DUSP22Q9NRW4 184 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 LANCL2Q9NS86 450 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SIRT3Q9NTG7 399 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 TRMT6Q9UJA5 497 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 UBXN8O00124 270 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 DFFAO00273 331 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CAPN5O15484 640 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 RGS14O43566 566 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CSTBP04080 98 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 NCF1P14598 390 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 DRD5P21918 477 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 XPAP23025 273 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 TIA1P31483 386 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ERVPABLB-1P60509 514 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 RHAGQ02094 409 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 STX3Q13277 289 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 THOC5Q13769 683 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 STARD3Q14849 445 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 POU4F3Q15319 338 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GUSBP1Q15486 140 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 C16orf89Q6UX73 402 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 MBOAT1Q6ZNC8 495 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 OVCH1Q7RTY7 1134 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CUZD1Q86UP6 607 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 MSRB3Q8IXL7 192 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 FAM47BQ8NA70 645 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 LINC01555Q8NAE3 123 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GANCQ8TET4 914 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 DDI1Q8WTU0 396 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 RASSF5Q8WWW0 418 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 DOK1Q99704 481 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF624Q9P2J8 865 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SPASTQ9UBP0 616 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ATPIF1Q9UII2 106 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 A0A088AWK7 358 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 NT5C1B-RDH14C9J2C7 533 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 FBP2O00757 339 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SLC16A6O15403 523 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 BUD23O43709 281 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CLDN7O95471 211 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CTSBP07858 339 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 FAM157BP0CG42 384 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GGT1P19440 569 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 PRKAR1BP31321 381 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CENPAP49450 140 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 PDX1P52945 283 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ARSFP54793 590 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SRSF2Q01130 221 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GGTLC2Q14390 218 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 MPEG1Q2M385 716 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF470Q6ECI4 717 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF770Q6IQ21 691 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 RHBDD2Q6NTF9 364 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GPRIN3Q6ZVF9 776 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 TRPM8Q7Z2W7 1104 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 DTX1Q86Y01 620 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SLC44A2Q8IWA5 706 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CACNA2D3Q8IZS8 1091 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 RAB42Q8N4Z0 105 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CISD2Q8N5K1 135 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CCDC197Q8NCU1 140 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 OR2L5Q8NG80 312 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 OR2L3Q8NG85 312 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 OR13C4Q8NGS5 318 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SNIP1Q8TAD8 396 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 PPP4R1Q8TF05 950 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF480Q8WV37 535 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 HS3ST6Q96QI5 342 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SORBS1Q9BX66 1292 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 WDR55Q9H6Y2 383 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 WDR26Q9H7D7 661 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 IARS2Q9NSE4 1012 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 INTS9Q9NV88 658 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 NKIRAS1Q9NYS0 192 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SRPK3Q9UPE1 567 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GSAPA4D1B5 854 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 H3BNX3 289 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 XPNPEP2O43895 674 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GRAP2O75791 330 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SMNDC1O75940 238 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 SCG5P05408 212 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CHRM5P08912 532 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ELFN1P0C7U0 828 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 EPHA1P21709 976 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 IDSP22304 550 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 EEF1A1P68104 462 aaKnown RBP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 KLC1Q07866 573 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ABHD18Q0P651 414 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CTBP1Q13363 440 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 GALNT3Q14435 633 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 EFTUD2Q15029 972 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCAF11-212ENST00000549162 NRF1Q16656 503 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ARHGAP11BQ3KRB8 267 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 ACSBG2Q5FVE4 666 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 EEF1A1P5Q5VTE0 462 aa4.63□□□□□ -1.67
SCAF11-212ENST00000549162 CAPN13Q6MZZ7 669 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms