RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 CYP17A1P05093 508 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 C8GP07360 202 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ANXA4P09525 319 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 IDSP22304 550 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 FEN1P39748 380 aaKnown RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 HNMTP50135 292 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 C21orf58P58505 322 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 HOXC5Q00444 222 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 SCN1BQ07699 218 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 SCARB2Q14108 478 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 LEXMQ3ZCV2 418 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ATP13A5Q4VNC0 1218 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ZNF385BQ569K4 471 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 FAM131AQ6UXB0 335 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 TRIM48Q8IWZ4 208 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 SLC34A3Q8N130 599 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 UBE2J2Q8N2K1 259 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 DBF4BQ8NFT6 615 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 PLD4Q96BZ4 506 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 C11orf24Q96F05 449 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 WDFY2Q96P53 400 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 TTLL2Q9BWV7 592 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 RPRD1BQ9NQG5 326 aaKnown RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 THSD1Q9NS62 852 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 SPATA6Q9NWH7 488 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ZDHHC3Q9NYG2 299 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 DNAJC27Q9NZQ0 273 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 CMAHPQ9Y471 501 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ZNF106Q9H2Y7 1883 aaKnown RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 B4DXG7 233 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF670-ZNF695F2Z2N8 137 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 TNFRSF21O75509 655 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 GASTP01350 101 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-228ENST00000548938 XCR1P46094 333 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 LIMS1P48059 325 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 CRISP1P54107 249 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 GPLD1P80108 840 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC7-228ENST00000548938 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 SLC44A2Q8IWA5 706 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-228ENST00000548938 LAS2Q8IYD9 372 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 VPS37AQ8NEZ2 397 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 PIP5K1AQ99755 562 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 MAPKAP1Q9BPZ7 522 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 ABCB9Q9NP78 766 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 SNX7Q9UNH6 387 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 AP1M2Q9Y6Q5 423 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 GADD45GO95257 159 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 CSF3P09919 207 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 SRCP12931 536 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 MYL9P24844 172 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 HBA1P69905 142 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 RHAGQ02094 409 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 ASAH1Q13510 395 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
HDAC7-228ENST00000548938 GLYR1Q49A26 553 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-228ENST00000548938 GCNT6Q5T4J0 391 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 FRMPD2BQ6IN97 320 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 SERPINA13PQ6UXR4 307 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 RASSF5Q8WWW0 418 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 MIXL1Q9H2W2 232 aa13.14□□□□□ -0.31
HDAC7-228ENST00000548938 NMNAT1Q9HAN9 279 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-228ENST00000548938 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 A0A0G2JMP0 313 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 SLC35F4A4IF30 521 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 AGAP14A8MT82 685 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 A8MVJ9 347 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 FAM25AB3EWG3 89 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 FAM25CB3EWG5 89 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 FAM25GB3EWG6 89 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 HBQ1P09105 142 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 ENDOUP21128 410 aaKnown RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 PSMA1P25786 263 aaKnown RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 DOC2AQ14183 400 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 SPHARQ15513 63 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 PAQR6Q6TCH4 344 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 VWA5B2Q8N398 1253 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF784Q8NCA9 323 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 RIPOR3Q96MK2 946 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 DEFB118Q96PH6 123 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 SLC25A19Q9HC21 320 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 ACOXLQ9NUZ1 547 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 DKK3Q9UBP4 350 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 FAM8A1Q9UBU6 413 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF282Q9UDV7 671 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 SEC14L4Q9UDX3 406 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 EXO1Q9UQ84 846 aaKnown RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 ADAM12O43184 909 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms