RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC22A14Q9Y267 594 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 SETD2Q9BYW2 2564 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 IGKV3D-11A0A0A0MRZ8 115 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 GOLGA6L10A0A0M3HER8 536 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 A8MVJ9 347 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 TGFBR3LH3BV60 316 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 ZSCAN12O43309 604 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 OR2J2O76002 312 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 OR6B1O95007 311 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 TUBB4AP04350 444 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 IFNA16P05015 189 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 SMIM10L1P0DMW3 83 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 MSX1P28360 303 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 AHRP35869 848 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 FNTAP49354 379 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 HNRNPFP52597 415 aaKnown RBP11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 SLC13A2Q13183 592 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 BMPR2Q13873 1038 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 PPP1R7Q15435 360 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 C18orf21Q32NC0 220 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 NIPAL1Q6NVV3 410 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 PAOXQ6QHF9 649 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 PPIL6Q8IXY8 311 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 FAM47BQ8NA70 645 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 ZFP62Q8NB50 900 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 PSD4Q8NDX1 1056 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 TMEM52Q8NDY8 209 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 TRPV3Q8NET8 790 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 OR2M7Q8NG81 312 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 ASB15Q8WXK1 588 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 FBXL8Q96CD0 374 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 SMIM10Q96HG1 83 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 FAR2Q96K12 515 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 PWWP2AQ96N64 755 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 AIF1LQ9BQI0 150 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 SARGQ9BW04 601 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 LIME1Q9H400 295 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 PRM3Q9NNZ6 103 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 CCM2LQ9NUG4 571 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 HPF1Q9NWY4 346 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 YARS2Q9Y2Z4 477 aaKnown RBP11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 LIPGQ9Y5X9 500 aa11.12□□□□□ -0.63
TRAFD1-205ENST00000548277 ZFAND5O76080 213 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 HOXD4P09016 255 aaPredicted RBP11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 IGFBP2P18065 325 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 TNNI3P19429 210 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 SOX3P41225 446 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 REEP5Q00765 189 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 CRYMQ14894 314 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 RNASEH2BQ5TBB1 312 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 NXPE4Q6UWF7 544 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 ACAD11Q709F0 780 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 ZNF321PQ8N8H1 164 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 CREB3L4Q8TEY5 395 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 ATL1Q8WXF7 558 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 SMC6Q96SB8 1091 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 EGFL8Q99944 293 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 DDX47Q9H0S4 455 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 EXO5Q9H790 373 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 GRPEL1Q9HAV7 217 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 DNAJB12Q9NXW2 375 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 SNX12Q9UMY4 172 aa11.11□□□□□ -0.63
TRAFD1-205ENST00000548277 KIAA1549Q9HCM3 1950 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 TACC2O95359 2948 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 ATP6AP2A0A1C7CYW4 349 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 ACOT7O00154 380 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 CDC7O00311 574 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 DNALI1O14645 258 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 KLK8O60259 260 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 ATP6AP2O75787 350 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 PGAM1P18669 254 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 GDF5P43026 501 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 MAGEA5P43359 124 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 GPR143P51810 404 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 PLA2G16P53816 162 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 AP1S2P56377 157 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 BBS9Q3SYG4 887 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 MSS51Q4VC12 460 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 WDR53Q7Z5U6 358 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 STRA8Q7Z7C7 330 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 LIX1LQ8IVB5 337 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 IGDCC3Q8IVU1 814 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 ZZZ3Q8IYH5 903 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 CLYBLQ8N0X4 340 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 GABPB2Q8TAK5 448 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 CFAP36Q96G28 342 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 TTYH2Q9BSA4 534 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 CNPPD1Q9BV87 410 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 TTTY12Q9BZ98 90 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 KCNF1Q9H3M0 494 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 LDAHQ9H6V9 325 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms