RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 RAD51CO43502 376 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 ASNA1O43681 348 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 B3GALT2O43825 422 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CCNT2O60583 730 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SLC19A2O60779 497 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 STK16O75716 305 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 FAM155BO75949 473 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 NEURL1O76050 574 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 MYO1DO94832 1006 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 S100BP04271 92 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CD1DP15813 335 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TPP2P29144 1249 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 PPP2R1BP30154 601 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CASQ1P31415 396 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 HNRNPH1P31943 449 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SLC6A12P48065 614 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 KCNC1P48547 511 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 HSPA7P48741 367 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CYB561P49447 251 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CASP6P55212 293 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 GPX6P59796 221 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 ATP6V0D1P61421 351 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 C2orf54Q08AI8 447 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SLC13A2Q13183 592 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 BMPR2Q13873 1038 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 OR4D1Q15615 310 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TRADDQ15628 312 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 KRTCAP3Q53RY4 240 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 XKR6Q5GH73 641 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SULT1C3Q6IMI6 304 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 QSOX2Q6ZRP7 698 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 RAPH1Q70E73 1250 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CLNKQ7Z7G1 428 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 MRGPRGQ86SM5 289 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SRRM1Q8IYB3 904 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 KLHDC8AQ8IYD2 350 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 C17orf53Q8N3J3 647 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TCAIMQ8N3R3 496 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TMEM178AQ8NBL3 297 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TTLQ8NG68 377 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SREK1Q8WXA9 508 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 MS4A6EQ96DS6 147 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 MRRFQ96E11 262 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SCMH1Q96GD3 660 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 F2RL3Q96RI0 385 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 RBBP8Q99708 897 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CPNE1Q99829 537 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 DERL2Q9GZP9 239 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 REXO4Q9GZR2 422 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 CNOT10Q9H9A5 744 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 LIN28AQ9H9Z2 209 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 PRTFDC1Q9NRG1 225 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 GPRC5BQ9NZH0 403 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 GRHL1Q9NZI5 618 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 WHRNQ9P202 907 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SUCOQ9UBS9 1254 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 FBXW2Q9UKT8 454 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF490Q9ULM2 529 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 RNF112Q9ULX5 631 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 UTP11Q9Y3A2 253 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 SPTAN1Q13813 2472 aaKnown RBP6.27□□□□□ -1.41
SCAF11-211ENST00000547950 TEX15Q9BXT5 2789 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 UNC79Q9P2D8 2635 aa6.27□□□□□ -1.41
SCAF11-211ENST00000547950 FER1L5A0AVI2 2057 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SHANK1Q9Y566 2161 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 A0A088AWK7 358 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 IGKV3D-11A0A0A0MRZ8 115 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TRBV11-1A0A0K0K1C0 115 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 FAM159BA6NKW6 160 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 FCHO1O14526 889 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 PRAMEF4O60810 478 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SH3BGRLO75368 114 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 CLEC3AO75596 197 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SLC25A12O75746 678 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 WISP3O95389 354 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 MLYCDO95822 493 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 IFNA16P05015 189 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SNRPB2P08579 225 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 PCNAP12004 261 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 TNNI3P19429 210 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF10P21506 573 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 GRNP28799 593 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 SPRP35270 261 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 GGT5P36269 586 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 GP5P40197 560 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 CA7P43166 264 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 MAGEA4P43358 317 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 HLCSP50747 726 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 CLCN2P51788 898 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 HNRNPFP52597 415 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 MLF1P58340 268 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 RAB10P61026 200 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 HSF1Q00613 529 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 IRF8Q02556 426 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 ILF2Q12905 390 aaKnown RBP6.26□□□□□ -1.41
SCAF11-211ENST00000547950 CHIT1Q13231 466 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 DOC2AQ14183 400 aa6.26□□□□□ -1.41
SCAF11-211ENST00000547950 C3AR1Q16581 482 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms