RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ERVK-11Q9UQG0 969 aa18.99■□□□□ 0.63
SSH1-207ENST00000547862 POLQO75417 2590 aa18.99■□□□□ 0.63
SSH1-207ENST00000547862 CELSR1Q9NYQ6 3014 aa18.99■□□□□ 0.63
SSH1-207ENST00000547862 TACC2O95359 2948 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 F8P00451 2351 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 ADGRG4Q8IZF6 3080 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 FAM90A27PA6NNH2 459 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 KLRC4-KLRK1H3BQV0 150 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 CES2O00748 559 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 ADAM10O14672 748 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 PRKNO60260 465 aaPredicted RBP18.98■□□□□ 0.63
SSH1-207ENST00000547862 H2AFYO75367 372 aaKnown RBP18.98■□□□□ 0.63
SSH1-207ENST00000547862 PIAS1O75925 651 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 C1GALT1C1LP0DN25 315 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 CERS1P27544 350 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 SSR4P51571 173 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 RAB38P57729 211 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 PDIA2Q13087 525 aaKnown RBP18.98■□□□□ 0.63
SSH1-207ENST00000547862 ADNP2Q6IQ32 1131 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 TMIGD1Q6UXZ0 262 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 MDGA2Q7Z553 956 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 ADAMTSL2Q86TH1 951 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 KLHDC8AQ8IYD2 350 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 FAM57AQ8TBR7 257 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 CSF3RQ99062 836 aa18.98■□□□□ 0.63
SSH1-207ENST00000547862 TRIM45Q9H8W5 580 aaPredicted RBP18.98■□□□□ 0.63
SSH1-207ENST00000547862 COPS7BQ9H9Q2 264 aaPredicted RBP18.98■□□□□ 0.63
SSH1-207ENST00000547862 CLK4Q9HAZ1 481 aaKnown RBP18.98■□□□□ 0.63
SSH1-207ENST00000547862 ZNF407Q9C0G0 2248 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 HCFC1P51610 2035 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 FAM166BA8MTA8 275 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 CLGNO14967 610 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 B3GALT2O43825 422 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 IFNA16P05015 189 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 GNAZP19086 355 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 TFEBP19484 476 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 SLC12A2P55011 1212 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 PLGLB1Q02325 96 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 TLE4Q04727 773 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 CMPK2Q5EBM0 449 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 SLCO4C1Q6ZQN7 724 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 SCUBE1Q8IWY4 988 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 SPATA6LQ8N4H0 392 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 SNX31Q8N9S9 440 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 EXT2Q93063 718 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 LRRC39Q96DD0 335 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 MS4A6EQ96DS6 147 aa18.97■□□□□ 0.63
SSH1-207ENST00000547862 ANKRD17O75179 2603 aaKnown RBP18.97■□□□□ 0.63
SSH1-207ENST00000547862 A8MVJ9 347 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 G3V3Y1 287 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 ZSCAN12O43309 604 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 HNMTP50135 292 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 NR0B1P51843 470 aaKnown RBP18.96■□□□□ 0.63
SSH1-207ENST00000547862 CDKL1Q00532 357 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 BMPR2Q13873 1038 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 TRIM40Q6P9F5 258 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 KRT78Q8N1N4 520 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 MARVELD2Q8N4S9 558 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 TTLQ8NG68 377 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 OR52N2Q8NGI0 321 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 ASB15Q8WXK1 588 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 ESAMQ96AP7 390 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 RHBDF1Q96CC6 855 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 VPS39Q96JC1 886 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 TMEM79Q9BSE2 394 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 DEFB127Q9H1M4 99 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 CAB39LQ9H9S4 337 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 ADAP2Q9NPF8 381 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 TIMMDC1Q9NPL8 285 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 HPF1Q9NWY4 346 aa18.96■□□□□ 0.63
SSH1-207ENST00000547862 MRPS33Q9Y291 106 aaKnown RBP18.96■□□□□ 0.63
SSH1-207ENST00000547862 PHF3Q92576 2039 aaKnown RBP18.96■□□□□ 0.63
SSH1-207ENST00000547862 A0A088AWK7 358 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 A0A0G2JMM0 328 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 A0A1W2PPB8 328 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 A0A1W2PRS3 328 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 ANKDD1BA6NHY2 528 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 KIR3DP1A8MWS1 328 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 CLDN4O14493 209 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 CDK2AP1O14519 115 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 OR2J2O76002 312 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 SEC31AO94979 1220 aaKnown RBP18.95■□□□□ 0.62
SSH1-207ENST00000547862 TUBB4AP04350 444 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 TCP1P17987 556 aaKnown RBP18.95■□□□□ 0.62
SSH1-207ENST00000547862 ZNF10P21506 573 aaPredicted RBP18.95■□□□□ 0.62
SSH1-207ENST00000547862 SLC6A12P48065 614 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 TERF2Q15554 542 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 IL20RBQ6UXL0 311 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 SYDE1Q6ZW31 735 aaPredicted RBP18.95■□□□□ 0.62
SSH1-207ENST00000547862 CDH24Q86UP0 819 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 RPRMLQ8N4K4 120 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 PSD4Q8NDX1 1056 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 REXO4Q9GZR2 422 aaKnown RBP18.95■□□□□ 0.62
SSH1-207ENST00000547862 DEPPQ9NTK1 212 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 CCDC168Q8NDH2 2452 aa18.95■□□□□ 0.62
SSH1-207ENST00000547862 INTS1Q8N201 2190 aaKnown RBP18.94■□□□□ 0.62
SSH1-207ENST00000547862 PINLYPA6NC86 204 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 NKX2-6A6NCS4 301 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 LRIT2A6NDA9 550 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 WWP2O00308 870 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms