RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CANT1Q8WVQ1 401 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 NRG4Q8WWG1 115 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 FIG4Q92562 907 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 EME1Q96AY2 570 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 MOAP1Q96BY2 351 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 MIEF2Q96C03 454 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 TM4SF19Q96DZ7 209 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 NAF1Q96HR8 494 aaKnown RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 SERINC2Q96SA4 455 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 SLC38A3Q99624 504 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 C17orf62Q9BQA9 187 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ASPSCR1Q9BZE9 553 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 DTNAQ9Y4J8 743 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 PRAMEF33A0A0G2JMD5 474 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 A0A1B0GTW7 788 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 TMEM247A6NEH6 219 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 B4DGG1 531 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 SRPX2O60687 465 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 CREG1O75629 220 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 UBXN7O94888 489 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 LDLRP01130 860 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 GBAP04062 536 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 DCNP07585 359 aaKnown RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ATP6V1B2P21281 511 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 BUD31P41223 144 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ALDH9A1P49189 494 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ARRB1P49407 418 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 PRIM2P49643 509 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 EPHA4P54764 986 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 YBX1P67809 324 aaKnown RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 SIGLEC14Q08ET2 396 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 C1orf61Q13536 156 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 VMACQ2NL98 169 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ZCCHC8Q6NZY4 707 aaKnown RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 DNAJC14Q6Y2X3 702 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 RABEPKQ7Z6M1 372 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ADGRG5Q8IZF4 528 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 DTWD1Q8N5C7 304 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ANKFN1Q8N957 763 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ACOT4Q8N9L9 421 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 C11orf65Q8NCR3 313 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 OR52N2Q8NGI0 321 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 C1orf216Q8TAB5 229 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ZFP90Q8TF47 636 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 NCLNQ969V3 563 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 CD180Q99467 661 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ZNF717Q9BY31 904 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 TCEAL2Q9H3H9 227 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 PIF1Q9H611 641 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 CLK4Q9HAZ1 481 aaKnown RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 PRDM7Q9NQW5 492 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 SEMA3GQ9NS98 782 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 DCAF13Q9NV06 445 aaKnown RBP12.79□□□□□ -0.36
PTCH1-215ENST00000547672 EPHA6Q9UF33 1036 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 RIMS3Q9UJD0 308 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 BAG5Q9UL15 447 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 ZNF451Q9Y4E5 1061 aa12.79□□□□□ -0.36
PTCH1-215ENST00000547672 CROCCQ5TZA2 2017 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 FANCMQ8IYD8 2048 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 HEATR5BQ9P2D3 2071 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 TCRBV5S2A0A599 114 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 RHPN2P1A8MT19 583 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 YY2O15391 372 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 LAMTOR5O43504 91 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 B3GALT2O43825 422 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 SH3BP5O60239 455 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 TBX6O95947 436 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-215ENST00000547672 WNT1P04628 370 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 MPIP34949 423 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 CDKN2CP42773 168 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 GZMMP51124 257 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 SELPLGQ14242 412 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 RGNQ15493 299 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 ZNF630Q2M218 657 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-215ENST00000547672 MRM1Q6IN84 353 aaKnown RBP12.78□□□□□ -0.36
PTCH1-215ENST00000547672 IZUMO2Q6UXV1 221 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 UBE3DQ7Z6J8 389 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 PLD3Q8IV08 490 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTCH1-215ENST00000547672 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 CLECL1Q8IZS7 167 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 ARL14Q8N4G2 192 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 METTL25Q8N6Q8 603 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 TMEM102Q8N9M5 508 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-215ENST00000547672 OR6C4Q8NGE1 309 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 FLVCR1-AS1Q8TAF5 88 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 NUDT8Q8WV74 236 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 ZDHHC12Q96GR4 267 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 TCTN2Q96GX1 697 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 OR2A5Q96R48 311 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 BBS4Q96RK4 519 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 PKP2Q99959 881 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 CCDC3Q9BQI4 270 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms