RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SPACA6W5XKT8 324 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 SHANK2Q9UPX8 1470 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 RGS12O14924 1447 aa3.9□□□□□ -1.78
SCAF11-210ENST00000547654 FHOD3Q2V2M9 1422 aa3.9□□□□□ -1.78
SCAF11-210ENST00000547654 A0A0U1RQJ8 604 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CCDC162PA2VCL2 907 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 NTN3O00634 580 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 LANCL1O43813 399 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 NME2P1O60361 137 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ACSL4O60488 711 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 TBX19O60806 448 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 TOM1L1O75674 476 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 SERPINI2O75830 405 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GAGE7O76087 117 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 RAF1P04049 648 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 UGT2B4P06133 528 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 LIPFP07098 398 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 SERPINF2P08697 491 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GSTA2P09210 222 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 FAM106CPP0CH98 169 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GAGE12FP0CL80 117 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GAGE12GP0CL81 117 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GAGE12IP0CL82 117 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 RRASP10301 218 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CETPP11597 493 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GNSP15586 552 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 RPA2P15927 270 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GOT1P17174 413 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ATP6V1C1P21283 382 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PAICSP22234 425 aaKnown RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CALB2P22676 271 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 TMOD1P28289 359 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 OTX2P32243 289 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CETN2P41208 172 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 OR3A3P47888 321 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PDLIM4P50479 330 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GEMP55040 296 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 MYBPC1Q00872 1141 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 BEX3Q00994 111 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ILF3Q12906 894 aaKnown RBP eCLIP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GAGE1Q13065 139 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GAGE4Q13068 117 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 NME3Q13232 169 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF234Q14588 700 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 STX1AQ16623 288 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CCDC152Q4G0S7 254 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CMPK2Q5EBM0 449 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 SPATA46Q5T0L3 261 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CYP4A22Q5TCH4 519 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 NKAIN2Q5VXU1 208 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ARHGAP17Q68EM7 881 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PMF1Q6P1K2 205 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PACS1Q6VY07 963 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 LRRC70Q7Z2Q7 622 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 LUZP1Q86V48 1076 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ZDHHC21Q8IVQ6 265 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 GPALPP1Q8IXQ4 340 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF34Q8IZ26 560 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 RNF113BQ8IZP6 322 aaKnown RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CLIP4Q8N3C7 705 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ZCCHC7Q8N3Z6 543 aaKnown RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 LRRC17Q8N6Y2 441 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 STKLD1Q8NE28 680 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 OR11H4Q8NGC9 324 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 OR2T34Q8NGX1 318 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 BRSK1Q8TDC3 778 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 IRGQQ8WZA9 623 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PIGBQ92521 554 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 TMEM19Q96HH6 336 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 C3orf30Q96M34 536 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 FAM20AQ96MK3 541 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ZBTB18Q99592 522 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PRMT1Q99873 361 aaKnown RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 UBAC1Q9BSL1 405 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 URM1Q9BTM9 101 aaKnown RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 TBCDQ9BTW9 1192 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 DCLK3Q9C098 648 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 MTMR12Q9C0I1 747 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 EGLN1Q9GZT9 426 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 C10orf88Q9H8K7 445 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 WDR76Q9H967 626 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 MARCH7Q9H992 704 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 C6orf203Q9P0P8 240 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 VPS54Q9P1Q0 977 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PTBP2Q9UKA9 531 aaKnown RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 TNNQ9UQP3 1299 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 ERVK-19Q9WJR5 959 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CAB39Q9Y376 341 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 TMED7Q9Y3B3 224 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 PTGDR2Q9Y5Y4 395 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 BCL9LQ86UU0 1499 aa3.9□□□□□ -1.79
SCAF11-210ENST00000547654 CDK13Q14004 1512 aaKnown RBP3.9□□□□□ -1.79
SCAF11-210ENST00000547654 IQGAP2Q13576 1575 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 CFAP74Q9C0B2 1584 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 A0A0G2JPF8 293 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 A0A1B0GUV1 79 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 TMEM89A2RUT3 159 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 SRRM3A6NNA2 597 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ANKRD30BLA7E2S9 258 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 TMEM110-MUSTN1A8MSY1 372 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms