RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	FAM159B	A6NKW6	160 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	IDS	B3KWA1	339 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440		I3L1I5	382 aa	Predicted RBP	7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	GSTA4	O15217	222 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	WISP3	O95389	354 aa	Predicted RBP	7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	COX6A1	P12074	109 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	CDH1	P12830	882 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	NPPB	P16860	134 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	SSTR1	P30872	391 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	GP5	P40197	560 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	BCL6	P41182	706 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	KIR2DL2	P43627	348 aa	Predicted RBP	7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	AVPR1B	P47901	424 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	HNMT	P50135	292 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	CCR8	P51685	355 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	PGGT1B	P53609	377 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC12A2	P55011	1212 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	TAS2R39	P59534	338 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	SKP1	P63208	163 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	MRPS25	P82663	173 aa	Known RBP	7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	RAPSN	Q13702	412 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZNF460	Q14592	562 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	VWA2	Q5GFL6	755 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	COLEC12	Q5KU26	742 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	FOXB2	Q5VYV0	432 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	ATG9B	Q674R7	924 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	NIPAL1	Q6NVV3	410 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	CLEC18B	Q6UXF7	455 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	CEP97	Q8IW35	865 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	TBC1D19	Q8N5T2	526 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	ANKS4B	Q8N8V4	417 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440		Q8NA96	180 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	MFSD9	Q8NBP5	474 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	CLEC18C	Q8NCF0	446 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	OR4K1	Q8NGD4	311 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	PPP4R1	Q8TF05	950 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC5A11	Q8WWX8	675 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	PYCR2	Q96C36	320 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	TM4SF19	Q96DZ7	209 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	TSPAN17	Q96FV3	270 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	OR4K3	Q96R72	315 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	GPR22	Q99680	433 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	RBBP8	Q99708	897 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	DERL2	Q9GZP9	239 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLAMF7	Q9NQ25	335 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	SMYD2	Q9NRG4	433 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	TXNDC16	Q9P2K2	825 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	IKZF3	Q9UKT9	509 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	B3GNT3	Q9Y2A9	372 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	OARD1	Q9Y530	152 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC22A7	Q9Y694	548 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	USP9X	Q93008	2570 aa	Predicted RBP	7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	EML6	Q6ZMW3	1958 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	LOC102723996	A0A087X1L8	192 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	IGHV1-45	A0A0A0MS14	117 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	NSG1	A0A0A6YYJ2	146 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	TRBC2	A0A5B9	178 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	FEZF1	A0PJY2	475 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	MASP2	O00187	686 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	CDC7	O00311	574 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	FFAR3	O14843	346 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	GPR42	O15529	346 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	NDUFS4	O43181	175 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	ALOX12B	O75342	701 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	GUCA1C	O95843	209 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	C1QA	P02745	245 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	CD8B	P10966	210 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	IL1RN	P18510	177 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	SAT1	P21673	171 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	CXCR2	P25025	360 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	STX2	P32856	288 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	AHR	P35869	848 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	EMP2	P54851	167 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	PLTP	P55058	493 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	RPL11	P62913	178 aa	Known RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	AP2B1	P63010	937 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	REEP5	Q00765	189 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	NAB1	Q13506	487 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	HERC3	Q15034	1050 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	TSN	Q15631	228 aa	Known RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZKSCAN8	Q15776	578 aa	Predicted RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	IGFBP7	Q16270	282 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	PRSS53	Q2L4Q9	553 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC35F1	Q5T1Q4	408 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	AGAP7P	Q5VUJ5	663 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	C8orf74	Q6P047	294 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	IGFL2	Q6UWQ7	119 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440		Q6ZS92	163 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	FRA10AC1	Q70Z53	315 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	NDUFAF7	Q7L592	441 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	TMPRSS11B	Q86T26	416 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	KLHDC8A	Q8IYD2	350 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	PRSS58	Q8IYP2	241 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	IQCK	Q8N0W5	287 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	TCAIM	Q8N3R3	496 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZADH2	Q8N4Q0	377 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	OR9A4	Q8NGU2	314 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	FBXO25	Q8TCJ0	367 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC13A3	Q8WWT9	602 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms