RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 C1orf189Q5VU69 101 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 ZNF385CQ66K41 422 aaPredicted RBP13.12□□□□□ -0.31
TSEN54-203ENST00000545228 ACSM2BQ68CK6 577 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 OR4C11Q6IEV9 310 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 OVCH1Q7RTY7 1134 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 TRIM46Q7Z4K8 759 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
TSEN54-203ENST00000545228 DDIASQ8IXT1 998 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 ZCCHC7Q8N3Z6 543 aaKnown RBP13.12□□□□□ -0.31
TSEN54-203ENST00000545228 OR9A4Q8NGU2 314 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 TWIST2Q8WVJ9 160 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 NKD1Q969G9 470 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 MTFMTQ96DP5 389 aaKnown RBP13.12□□□□□ -0.31
TSEN54-203ENST00000545228 PPP3R2Q96LZ3 170 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 IP6K3Q96PC2 410 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 F2RL3Q96RI0 385 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 CHST8Q9H2A9 424 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 LYRM4Q9HD34 91 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 TRPC4Q9UBN4 977 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 HAO1Q9UJM8 370 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 ZNF225Q9UK10 706 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 TMED5Q9Y3A6 229 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 FIS1Q9Y3D6 152 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 PCDHGA6Q9Y5G7 932 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 AHCTF1Q8WYP5 2266 aa13.12□□□□□ -0.31
TSEN54-203ENST00000545228 PPP6CO00743 305 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 CLDN4O14493 209 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 SLC28A2O43868 658 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 SNNO75324 88 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-203ENST00000545228 SMIM10L1P0DMW3 83 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 HIST1H1TP22492 207 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-203ENST00000545228 PPP2R1BP30154 601 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 NEK2P51955 445 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 RAB8AP61006 207 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 HYAL2Q12891 473 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 SLC9A5Q14940 896 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 SPDYAQ5MJ70 313 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 PRAMEF17Q5VTA0 474 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 MLIPQ5VWP3 458 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 RAB43Q86YS6 212 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 LRRC34Q8IZ02 419 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 FAM9CQ8IZT9 166 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 ARHGEF39Q8N4T4 335 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 CT55Q8WUE5 264 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 CKAP2Q8WWK9 683 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 ZNF75CPQ92670 426 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-203ENST00000545228 MIEF2Q96C03 454 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 MOCOSQ96EN8 888 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 SMIM10Q96HG1 83 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 C7orf26Q96N11 449 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 SHCBP1LQ9BZQ2 653 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 TGIF2Q9GZN2 237 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 OR51B5Q9H339 312 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 ACSS2Q9NR19 701 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 CROTQ9UKG9 612 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
TSEN54-203ENST00000545228 TIMM22Q9Y584 194 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 ZNF462Q96JM2 2506 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 KALRNO60229 2985 aa13.11□□□□□ -0.31
TSEN54-203ENST00000545228 IGLV3-12A0A075B6K2 115 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 NPIPB8E9PQR5 432 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 PLPP1O14494 284 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 FOXS1O43638 330 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 RDH16O75452 317 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 STATHP02808 62 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 CTSBP07858 339 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 PRPH2P23942 346 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 PTPN4P29074 926 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 RAB38P57729 211 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 TRA2BP62995 288 aaKnown RBP13.1□□□□□ -0.31
TSEN54-203ENST00000545228 KCNC4Q03721 635 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 BIKQ13323 160 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 ABRAXAS2Q15018 415 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 NR6A1Q15406 480 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 ATP6AP1LQ52LC2 224 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 CRTC2Q53ET0 693 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-203ENST00000545228 CLEC6AQ6EIG7 209 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 FAM198BQ6UWH4 519 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 RGS9BPQ6ZS82 235 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 TIPARPQ7Z3E1 657 aaKnown RBP13.1□□□□□ -0.31
TSEN54-203ENST00000545228 METTL4Q8N3J2 472 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 ACOT4Q8N9L9 421 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 SLC38A9Q8NBW4 561 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 OR51Q1Q8NH59 317 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 PIWIL2Q8TC59 973 aaKnown RBP13.1□□□□□ -0.31
TSEN54-203ENST00000545228 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 METTL21AQ8WXB1 218 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 C19orf60Q96EN9 201 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 KCNA7Q96RP8 456 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 MACROD1Q9BQ69 325 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 SIKE1Q9BRV8 207 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 FAIM2Q9BWQ8 316 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 CLMPQ9H6B4 373 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 DDX31Q9H8H2 851 aaKnown RBP13.1□□□□□ -0.31
TSEN54-203ENST00000545228 PRDM9Q9NQV7 894 aa13.1□□□□□ -0.31
TSEN54-203ENST00000545228 SEMA3GQ9NS98 782 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms