RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 GABRA1P14867 456 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 FDFT1P37268 417 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 CETN2P41208 172 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 HNF4AP41235 474 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 ZNF136P52737 540 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 RAB8AP61006 207 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 SLC10A1Q14973 349 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 TERF2Q15554 542 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 CAVIN1Q6NZI2 390 aaKnown RBP8.68□□□□□ -1.02
CHD4-212ENST00000545083 CENPUQ71F23 418 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 P3H2Q8IVL5 708 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 UTP15Q8TED0 518 aaKnown RBP8.68□□□□□ -1.02
CHD4-212ENST00000545083 ALKBH8Q96BT7 664 aaKnown RBP8.68□□□□□ -1.02
CHD4-212ENST00000545083 MFSD3Q96ES6 412 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 YIPF4Q9BSR8 244 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 FAM129AQ9BZQ8 928 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 SLC6A15Q9H2J7 730 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 SPNS1Q9H2V7 528 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 PNO1Q9NRX1 252 aaKnown RBP8.68□□□□□ -1.02
CHD4-212ENST00000545083 MYOTQ9UBF9 498 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 MTRF1LQ9UGC7 380 aaKnown RBP8.68□□□□□ -1.02
CHD4-212ENST00000545083 PCDHA13Q9Y5I0 950 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 ARHGAP21Q5T5U3 1957 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 KIAA1549Q9HCM3 1950 aa8.68□□□□□ -1.02
CHD4-212ENST00000545083 RNF212BA8MTL3 300 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 GOLGA6L19H0YKK7 550 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 OR1F1O43749 312 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 HCN1O60741 890 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 CRLF1O75462 422 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 IFNB1P01574 187 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 APRTP07741 180 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 SMIM10L1P0DMW3 83 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 RNH1P13489 461 aaKnown RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 NPPBP16860 134 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 GRK3P35626 688 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 AGFG1P52594 562 aaKnown RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 HNRNPFP52597 415 aaKnown RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 HK2P52789 917 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 NAE1Q13564 534 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 PWP1Q13610 501 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 OASLQ15646 514 aaKnown RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 RNF187Q5TA31 235 aaPredicted RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 HECTD2Q5U5R9 776 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 MRNIPQ6NTE8 343 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 ZNF549Q6P9A3 640 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 ADGRD1Q6QNK2 874 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 AGTRAPQ6RW13 159 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 LCTLQ6UWM7 567 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 RTL4Q6ZR62 310 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 FAM47EQ6ZV65 393 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 UBE2R2Q712K3 238 aaPredicted RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 SDCCAG8Q86SQ7 713 aaPredicted RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 VSTM4Q8IW00 320 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 SCUBE1Q8IWY4 988 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 LRRC75A-AS1Q8N1F1 130 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 CA13Q8N1Q1 262 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 FBXW8Q8N3Y1 598 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 ZNF321PQ8N8H1 164 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 TMEM52Q8NDY8 209 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 ABHD11Q8NFV4 315 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 NT5CQ8TCD5 201 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 SMIM10Q96HG1 83 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 TCF12Q99081 682 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 CCDC77Q9BR77 488 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 KIFC1Q9BW19 673 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 SGPP1Q9BX95 441 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 AICDAQ9GZX7 198 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 PCBD2Q9H0N5 130 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 KLHL31Q9H511 634 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 EXO5Q9H790 373 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 SYBUQ9NX95 663 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 SAMD15Q9P1V8 674 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 FOXD3Q9UJU5 478 aaPredicted RBP8.67□□□□□ -1.02
CHD4-212ENST00000545083 ADAMTS6Q9UKP5 1117 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 ATG4BQ9Y4P1 393 aa8.67□□□□□ -1.02
CHD4-212ENST00000545083 MYOCOSA0A1B0GUC4 107 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 SYCE3A1L190 88 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 PSMD12O00232 456 aaPredicted RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 CLDN4O14493 209 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 SMPD2O60906 423 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 PTMAP06454 111 aaKnown RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 ZSCAN5DPP0CG00 497 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 OGNP20774 298 aaKnown RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 PIGAP37287 484 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 SORDQ00796 357 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 KRTAP1-1Q07627 177 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 CBLBQ13191 982 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 TTLL9Q3SXZ7 439 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 ACSF3Q4G176 576 aaPredicted RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 CATSPEREQ5SY80 951 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 CAPN12Q6ZSI9 719 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 ABHD13Q7L211 337 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 MAATS1Q7Z4T9 603 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 YTHDF3Q7Z739 585 aaKnown RBP8.66□□□□□ -1.02
CHD4-212ENST00000545083 KIF18BQ86Y91 864 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 CPNE9Q8IYJ1 553 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 LRRC57Q8N9N7 239 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 GOLM1Q8NBJ4 401 aa8.66□□□□□ -1.02
CHD4-212ENST00000545083 OR4K1Q8NGD4 311 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms