RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	KCNC2	Q96PR1	638 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	PSMG3-AS1	Q96PY0	264 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	PAFAH2	Q99487	392 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	NPAS2	Q99743	824 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	SLX1A	Q9BQ83	275 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	TBCD	Q9BTW9	1192 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	KCNK13	Q9HB14	408 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	NECTIN3	Q9NQS3	549 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	PRDM7	Q9NQW5	492 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	PLA2G3	Q9NZ20	509 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	STMN3	Q9NZ72	180 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	DAPP1	Q9UN19	280 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	TNPO3	Q9Y5L0	923 aa	Known RBP	12.57	□□□□□ -0.4
POLE-222	ENST00000545015	COL12A1	Q99715	3063 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	CPAMD8	Q8IZJ3	1885 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015	POLE	Q07864	2286 aa		12.57	□□□□□ -0.4
POLE-222	ENST00000545015		A0A087WUV0	522 aa	Predicted RBP	12.56	□□□□□ -0.4
POLE-222	ENST00000545015	SAGE2P	A6NJ88	616 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	FAM227A	F5H4B4	570 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	CYR61	O00622	381 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	B3GALT2	O43825	422 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	KRT38	O76015	456 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	RBP1	P09455	135 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	MYBL2	P10244	700 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	EDN3	P14138	238 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	MAOA	P21397	527 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	PIK3CB	P42338	1070 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	RCN2	Q14257	317 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	UAP1	Q16222	522 aa	Predicted RBP	12.56	□□□□□ -0.4
POLE-222	ENST00000545015	LIPJ	Q5W064	366 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	ADNP2	Q6IQ32	1131 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	UBE3D	Q7Z6J8	389 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	IFT20	Q8IY31	132 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	ZNF595	Q8IYB9	648 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	CNPY4	Q8N129	248 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	SLC5A8	Q8N695	610 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	BCORP1	Q8N888	145 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	C7orf57	Q8NEG2	295 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	DCAKD	Q8WVC6	231 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	CCT6B	Q92526	530 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	EXT2	Q93063	718 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	MRRF	Q96E11	262 aa	Known RBP	12.56	□□□□□ -0.4
POLE-222	ENST00000545015	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.56	□□□□□ -0.4
POLE-222	ENST00000545015	LYRM4	Q9HD34	91 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	PSD3	Q9NYI0	1048 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	TMCO1	Q9UM00	188 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	MRPS33	Q9Y291	106 aa	Known RBP	12.56	□□□□□ -0.4
POLE-222	ENST00000545015	ESPL1	Q14674	2120 aa		12.56	□□□□□ -0.4
POLE-222	ENST00000545015	USP9Y	O00507	2555 aa	Predicted RBP	12.55	□□□□□ -0.4
POLE-222	ENST00000545015	BLACE	A4D250	179 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	ANKUB1	A6NFN9	424 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	WIPF3	A6NGB9	483 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015		H0YIV9	168 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	CLDN4	O14493	209 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	PRAMEF2	O60811	474 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	DDAH2	O95865	285 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	MSH2	P43246	934 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	PIK3CG	P48736	1102 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	PLA2G16	P53816	162 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	LIM2	P55344	173 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	TAS2R50	P59544	299 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	ZNF33B	Q06732	778 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	PFKFB4	Q16877	469 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	TSNAXIP1	Q2TAA8	658 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	DEPDC1	Q5TB30	811 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	FAM180A	Q6UWF9	173 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	CHSY3	Q70JA7	882 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.55	□□□□□ -0.4
POLE-222	ENST00000545015	CRLF3	Q8IUI8	442 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	BEST3	Q8N1M1	668 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	PLD6	Q8N2A8	252 aa	Known RBP	12.55	□□□□□ -0.4
POLE-222	ENST00000545015	L3MBTL4	Q8NA19	623 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	MDS2	Q8NDY4	140 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	DNAJB8	Q8NHS0	232 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	CMTM7	Q96FZ5	175 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	F2RL3	Q96RI0	385 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	TAAR6	Q96RI8	345 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	VPS11	Q9H270	941 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	KCMF1	Q9P0J7	381 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	ABI3	Q9P2A4	366 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	MAP10	Q9P2G4	905 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	PPT2	Q9UMR5	302 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	PCDHGA11	Q9Y5H2	935 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	IKBKG	Q9Y6K9	419 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	SCN2A	Q99250	2005 aa		12.55	□□□□□ -0.4
POLE-222	ENST00000545015	DOPEY2	Q9Y3R5	2298 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015		A0A0G2JN53	185 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015		A8MUI8	341 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	STX16-NPEPL1	H3BU86	382 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	STX16	O14662	325 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	SEMA7A	O75326	666 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	UQCRH	P07919	91 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	GFAP	P14136	432 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	ATP5A1	P25705	553 aa	Known RBP	12.54	□□□□□ -0.4
POLE-222	ENST00000545015	CERS1	P27544	350 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	GPR143	P51810	404 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	TUBA3C	Q13748	450 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.54	□□□□□ -0.4
POLE-222	ENST00000545015	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.54	□□□□□ -0.4
POLE-222	ENST00000545015	TUBA3E	Q6PEY2	450 aa		12.54	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms