RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CELSR3Q9NYQ7 3312 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 CCDC88CQ9P219 2028 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 DMXL2Q8TDJ6 3036 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 IGLV3-12A0A075B6K2 115 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 VSTM2BA6NLU5 285 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 KLF7O75840 302 aaPredicted RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 SCELO95171 688 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 CD63P08962 238 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 HIST1H1TP22492 207 aaPredicted RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 ATP5A1P25705 553 aaKnown RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 BSGP35613 385 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 TSFMP43897 325 aaKnown RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 XCR1P46094 333 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 HMGCS1Q01581 520 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 TLE3Q04726 772 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 RUNX2Q13950 521 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 NUDT13Q86X67 352 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 ZC3H7AQ8IWR0 971 aaKnown RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 METTL4Q8N3J2 472 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 ARFGAP2Q8N6H7 521 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 LRRC8CQ8TDW0 803 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 TWIST2Q8WVJ9 160 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 ZNF75CPQ92670 426 aaPredicted RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 MIEF2Q96C03 454 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 ZNF717Q9BY31 904 aaPredicted RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 FAM117AQ9C073 453 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 TUBB1Q9H4B7 451 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 SOX17Q9H6I2 414 aaPredicted RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 WDR54Q9H977 334 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 CLK4Q9HAZ1 481 aaKnown RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 AHSPQ9NZD4 102 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 NXT1Q9UKK6 140 aaKnown RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 TCFL5Q9UL49 500 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 PTRH2Q9Y3E5 179 aaKnown RBP12.88□□□□□ -0.35
SP140-213ENST00000543928 PTGDR2Q9Y5Y4 395 aa12.88□□□□□ -0.35
SP140-213ENST00000543928 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 A0A087WV48 116 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 KLF11O14901 512 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 PIP5K1BO14986 540 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 EEDO75530 441 aaKnown RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 SKAP2O75563 359 aaPredicted RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 BMP10O95393 424 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 ZGLP1P0C6A0 271 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 WT1P19544 449 aaPredicted RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 ITPKBP27987 946 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 FOLR3P41439 243 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 RPL14P50914 215 aaKnown RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 TBL3Q12788 808 aaKnown RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 IMPG1Q17R60 797 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 BROXQ5VW32 411 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 RNF165Q6ZSG1 346 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 SHISA6Q6ZSJ9 500 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 TMEM151BQ8IW70 566 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 DDIASQ8IXT1 998 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 ZCCHC7Q8N3Z6 543 aaKnown RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 STARD8Q92502 1023 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 SLC45A3Q96JT2 553 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 SPSB2Q99619 263 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 RBCK1Q9BYM8 510 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 TGIF2Q9GZN2 237 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
SP140-213ENST00000543928 C14orf105Q9NVL8 296 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 HAO1Q9UJM8 370 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 ZMIZ1Q9ULJ6 1067 aa12.87□□□□□ -0.35
SP140-213ENST00000543928 A0A0A6YYD5 115 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 PSMD12O00232 456 aaPredicted RBP12.86□□□□□ -0.35
SP140-213ENST00000543928 SLC28A1O00337 649 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 EFSO43281 561 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 JRKO75564 520 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 CREG1O75629 220 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 GBAP04062 536 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 KLK1P06870 262 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 FHP07954 510 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 LINC00032P0C843 101 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 RNH1P13489 461 aaKnown RBP12.86□□□□□ -0.35
SP140-213ENST00000543928 LIM2P55344 173 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 RAB38P57729 211 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 OCRLQ01968 901 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 BTKQ06187 659 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 KLC1Q07866 573 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 SLAMF1Q13291 335 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 ERV3-1Q14264 604 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 SPDYAQ5MJ70 313 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 MFSD4BQ5TF39 518 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 CYP20A1Q6UW02 462 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 CCDC81Q6ZN84 652 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 PAGE2Q7Z2X7 111 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 COMMD6Q7Z4G1 85 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 KIRREL3Q8IZU9 778 aa12.86□□□□□ -0.35
SP140-213ENST00000543928 C1orf52Q8N6N3 182 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms