RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 LRRC32Q14392 662 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 C10orf62Q5T681 223 aaPredicted RBP12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 SLC5A8Q8N695 610 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 IQCF1Q8N6M8 205 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 SLC37A3Q8NCC5 494 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 RIPOR3Q96MK2 946 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 SLC22A4Q9H015 551 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 SPATA7Q9P0W8 599 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 HCN4Q9Y3Q4 1203 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 FAM170BA6NMN3 283 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 SMAD6O43541 496 aaKnown RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 IGFBP4P22692 258 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 HTR1BP28222 390 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 GRIA2P42262 883 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 DPP6P42658 865 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 CDH11P55287 796 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 PRR5P85299 388 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 GFOD2Q3B7J2 385 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 ATAT1Q5SQI0 421 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 FAM46CQ5VWP2 391 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 CES4AQ5XG92 561 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 RSPO2Q6UXX9 243 aaPredicted RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 BTN2A1Q7KYR7 527 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 ZNF551Q7Z340 670 aaPredicted RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 COX18Q8N8Q8 333 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 OR13J1Q8NGT2 312 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 TTLL2Q9BWV7 592 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 IRAK3Q9Y616 596 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 SOX30O94993 753 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 HSD17B1P14061 328 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 SCAPQ12770 1279 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 METTL25Q8N6Q8 603 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 LRRC20Q8TCA0 184 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 MYEOVQ96EZ4 313 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 RBCK1Q9BYM8 510 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 TP63Q9H3D4 680 aaPredicted RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 TMEM181Q9P2C4 612 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 UTS2RQ9UKP6 389 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 CABIN1Q9Y6J0 2220 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 VILLO15195 856 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 ADAMTS4O75173 837 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 EEDO75530 441 aaKnown RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 SLC25A12O75746 678 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 TFPIP10646 304 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 RPL26P61254 145 aaKnown RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 ZNF311Q5JNZ3 666 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 KHDRBS2Q5VWX1 349 aaKnown RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 FOXB2Q5VYV0 432 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 THOC7Q6I9Y2 204 aaKnown RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 VITQ6UXI7 678 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 C1orf216Q8TAB5 229 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 PMM1Q92871 262 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 RBM18Q96H35 190 aaKnown RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 ZNF597Q96LX8 424 aa12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 YARS2Q9Y2Z4 477 aaKnown RBP12.45□□□□□ -0.42
TUBGCP2-210ENST00000543663 SPTBN2O15020 2390 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 A8MUA0 341 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 H0YAE9 185 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 PAK4O96013 591 aaPredicted RBP12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 PRNPP04156 253 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 SLC6A4P31645 630 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ACTR1BP42025 376 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ACTR1AP61163 376 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 NTHL1P78549 312 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ZNF33AQ06730 810 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 NNATQ16517 81 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 SHQ1Q6PI26 577 aaKnown RBP12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 GALNT13Q8IUC8 556 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 OR51A7Q8NH64 312 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 C1QTNF7Q9BXJ2 289 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 OR51E2Q9H255 320 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ZBTB20Q9HC78 741 aaPredicted RBP12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 CCDC59Q9P031 241 aaKnown RBP12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 POU2F3Q9UKI9 436 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 USP3Q9Y6I4 520 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 RTTNQ86VV8 2226 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 SHROOM3Q8TF72 1996 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ALPK2Q86TB3 2170 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 MCIDASD6RGH6 385 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 NDUFS4O43181 175 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 IFNGP01579 166 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 MATN1P21941 496 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ARRB2P32121 409 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 AP1S2P56377 157 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 TMEM115Q12893 351 aaPredicted RBP12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 PPIGQ13427 754 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■■□□ 19.2
TUBGCP2-210ENST00000543663 TMEM126BQ8IUX1 230 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 CPA6Q8N4T0 437 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ZNF461Q8TAF7 563 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 TSEN15Q8WW01 171 aaKnown RBP12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 DPP7Q9UHL4 492 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 PHF24Q9UPV7 400 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 STC2O76061 302 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 ADH1CP00326 375 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 OR12D1P0DN82 309 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 TYRP14679 529 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 RPS3P23396 243 aaKnown RBP eCLIP12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 FCHO2Q0JRZ9 810 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 PEX5LQ8IYB4 626 aa12.44□□□□□ -0.42
TUBGCP2-210ENST00000543663 SPARTQ8N0X7 666 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms