RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 E2F2Q14209 437 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ABRAXAS2Q15018 415 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TLR1Q15399 786 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EXT1Q16394 746 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PFKFB4Q16877 469 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 BTBD16Q32M84 506 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ADPRMQ3LIE5 342 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SFT2D3Q587I9 215 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LGSNQ5TDP6 509 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 H3F3CQ6NXT2 135 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MYO7BQ6PIF6 2116 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 QSOX2Q6ZRP7 698 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TRMT10CQ7L0Y3 403 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GSPT2Q8IYD1 628 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CA13Q8N1Q1 262 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SIRT6Q8N6T7 355 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CATSPER1Q8NEC5 780 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ARMC2Q8NEN0 867 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 UHMK1Q8TAS1 419 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZNF354BQ96LW1 612 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 QRFPRQ96P65 431 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PAFAH2Q99487 392 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LPAR4Q99677 370 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SLC29A3Q9BZD2 475 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 REXO4Q9GZR2 422 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PLA2G3Q9NZ20 509 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TEKT2Q9UIF3 430 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZNF180Q9UJW8 692 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ASB1Q9Y576 335 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ANGPTL3Q9Y5C1 460 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TNPO3Q9Y5L0 923 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CSAG2Q9Y5P2 127 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RELNP78509 3460 aa9.15□□□□□ -0.95
TNFRSF1A-214ENST00000543048 POLEQ07864 2286 aa9.15□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DIDO1Q9BTC0 2240 aaKnown RBP9.15□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 C4orf51C9J302 202 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FAM227AF5H4B4 570 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ERI3O43414 337 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 B3GALT2O43825 422 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 KLK8O60259 260 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TBX6O95947 436 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SNRPAP09012 282 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MYBL2P10244 700 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GFAPP14136 432 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CD22P20273 847 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GNLYP22749 145 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MAGEA12P43365 314 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TSFMP43897 325 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PLA2G16P53816 162 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF169Q14929 603 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SETDB1Q15047 1291 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PCBP2Q15366 365 aaKnown RBP eCLIP9.14□□□□□ -0.951e-6■■■■□ 21.9
TNFRSF1A-214ENST00000543048 PRR30Q53SZ7 412 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ABHD17BQ5VST6 288 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 B3GNTL1Q67FW5 361 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RPUSD3Q6P087 351 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 METTL2BQ6P1Q9 378 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MED27Q6P2C8 311 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TRIM40Q6P9F5 258 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ABHD17CQ6PCB6 329 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 EMBQ6PCB8 327 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PAPD4Q6PIY7 484 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CHSY3Q70JA7 882 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 VN1R5Q7Z5H4 357 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LAS2Q8IYD9 372 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CYP4X1Q8N118 509 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PLD6Q8N2A8 252 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TEX9Q8N6V9 391 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 AMER2Q8N7J2 671 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SRFBP1Q8NEF9 429 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 OR2L5Q8NG80 312 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 OR1N1Q8NGS0 311 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 AENQ8WTP8 325 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DCAKDQ8WVC6 231 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TSLPQ969D9 159 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ISL2Q96A47 359 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CNDP1Q96KN2 507 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 F2RL3Q96RI0 385 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SERINC2Q96SA4 455 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RBCK1Q9BYM8 510 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 KCNK13Q9HB14 408 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MMP25Q9NPA2 562 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PRDM7Q9NQW5 492 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ASF1BQ9NVP2 202 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ADGRE2Q9UHX3 823 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TMCO1Q9UM00 188 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MMACHCQ9Y4U1 282 aa9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 UTP20O75691 2785 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 USP9XQ93008 2570 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PTPN13Q12923 2485 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TRAV17A0A0B4J275 112 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 A0A0G2JN53 185 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 EXOC1LA0A1B0GW35 172 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TCP11X1B4DZS4 312 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TRIM49D1C9J1S8 452 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLDN4O14493 209 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CBX6O95503 412 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms