RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CFAP20Q9Y6A4 193 aaKnown RBP12.64□□□□□ -0.39
TNC-212ENST00000542877 A0A1W2PQ45 241 aaPredicted RBP12.64□□□□□ -0.39
TNC-212ENST00000542877 A0A1W2PQY0 241 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 MTMR11A4FU01 709 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 NUAK1O60285 661 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 MT-ND2P03891 347 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
TNC-212ENST00000542877 RAB8AP61006 207 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 CHAF1BQ13112 559 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 ZNF366Q8N895 744 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 FANK1Q8TC84 345 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 RANBP3Q9H6Z4 567 aaPredicted RBP12.64□□□□□ -0.39
TNC-212ENST00000542877 FAM118AQ9NWS6 357 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 ABCD2Q9UBJ2 740 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 MMP20O60882 483 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 TNFP01375 233 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 INHAP05111 366 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 CTSOP43234 321 aaPredicted RBP12.64□□□□□ -0.39
TNC-212ENST00000542877 RPA4Q13156 261 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 TAS1R3Q7RTX0 852 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 OR8J1Q8NGP2 316 aa12.64□□□□□ -0.39
TNC-212ENST00000542877 CAPN14A8MX76 684 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 VILLO15195 856 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CDC40O60508 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNC-212ENST00000542877 PDYNP01213 254 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 C8orf89P0DMQ9 161 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CELP19835 753 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 S100A10P60903 97 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 PRKCZQ05513 592 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNC-212ENST00000542877 SAMD12Q8N8I0 201 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 LSM14AQ8ND56 463 aaKnown RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 HCAR2Q8TDS4 363 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 SGCDQ92629 289 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 RAB8BQ92930 207 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 LAMP5Q9UJQ1 280 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 ZNF821O75541 412 aaPredicted RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 BCKDHAP12694 445 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 HSD17B1P14061 328 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 GSTM2P28161 218 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 MAP2K3P46734 347 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 ZNF81P51508 661 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 OCLNQ16625 522 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 EXOC3L2Q2M3D2 409 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 LCN8Q6JVE9 175 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 BAIAP2L2Q6UXY1 529 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CTU1Q7Z7A3 348 aaKnown RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 OR51G2Q8NGK0 314 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 GAL3ST3Q96A11 431 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 TRIM43Q96BQ3 446 aaPredicted RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 OR2B2Q9GZK3 357 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 SOX17Q9H6I2 414 aaPredicted RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 CD93Q9NPY3 652 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 NDRG2Q9UN36 371 aaKnown RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 TRAV6A0A075B6T7 132 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 MYOCOSA0A1B0GUC4 107 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 C13orf42A0A1B0GVH6 325 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 RP2O75695 350 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 MYF6P23409 242 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CDKN1CP49918 316 aaPredicted RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 NPRL3Q12980 569 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CCL14Q16627 93 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 UGT8Q16880 541 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 RPL13AP3Q6NVV1 102 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 LRRC69Q6ZNQ3 347 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 PLEKHG7Q6ZR37 379 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CCDC28AQ8IWP9 274 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CMTR2Q8IYT2 770 aaKnown RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 FAM86B1Q8N7N1 296 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 SH2B3Q9UQQ2 575 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 FAM72CH0Y354 149 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 F2P00734 622 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 TIA1P31483 386 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNC-212ENST00000542877 MAGEA8P43361 318 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 RING1Q06587 406 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 TMEM115Q12893 351 aaPredicted RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 IRF5Q13568 498 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 FAM72AQ5TYM5 149 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 LIPKQ5VXJ0 399 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 FAM72DQ6L9T8 149 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 FAM72BQ86X60 149 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 KRTCAP2Q8N6L1 136 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 MGLLQ99685 303 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
TNC-212ENST00000542877 RNF121Q9H920 327 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 TDP1Q9NUW8 608 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 A0A0D9SEW6 157 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 SMIM30A4D0T7 59 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 A8MUA0 341 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 E7EQ34 232 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 BLOC1S5-TXNDC5H3BN57 136 aa12.63□□□□□ -0.39
TNC-212ENST00000542877 FANCGO15287 622 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms