RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 BTNL2Q9UIR0 455 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 SNX13Q9Y5W8 968 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 SNX11Q9Y5W9 270 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 A0A0A6YYD5 115 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 A0A0J9YY10 115 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 TCRBV3S1A0A5B6 114 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 CLIC1O00299 241 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 C8BP07358 591 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 TDGF1P13385 188 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 ENGP17813 658 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 DDCP20711 480 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 HIST1H1TP22492 207 aaPredicted RBP10.48□□□□□ -0.73
SCG3-202ENST00000542355 PPM1FP49593 454 aaPredicted RBP10.48□□□□□ -0.73
SCG3-202ENST00000542355 KLC1Q07866 573 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 SLAMF1Q13291 335 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 COL9A2Q14055 689 aaPredicted RBP10.48□□□□□ -0.73
SCG3-202ENST00000542355 SLC9A5Q14940 896 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 LCN8Q6JVE9 175 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 C1orf210Q8IVY1 113 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 MAML2Q8IZL2 1156 aaPredicted RBP10.48□□□□□ -0.73
SCG3-202ENST00000542355 CLEC4FQ8N1N0 589 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 C10orf111Q8N326 155 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 OR4A15Q8NGL6 344 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 BAHD1Q8TBE0 780 aaPredicted RBP10.48□□□□□ -0.73
SCG3-202ENST00000542355 UCN3Q969E3 161 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 TRIM15Q9C019 465 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 TEX10Q9NXF1 929 aaPredicted RBP10.48□□□□□ -0.73
SCG3-202ENST00000542355 PILRAQ9UKJ1 303 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 PCDHGB4Q9UN71 923 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 WBP11Q9Y2W2 641 aaKnown RBP10.48□□□□□ -0.73
SCG3-202ENST00000542355 PCDHB3Q9Y5E6 796 aa10.48□□□□□ -0.73
SCG3-202ENST00000542355 FANCMQ8IYD8 2048 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 KNL1Q8NG31 2342 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 LOC105369274A0A096LPK9 316 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 LOC102723532A0A0G2JNH3 316 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 A0A1B0GTW7 788 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 EVPLLA8MZ36 301 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 EPN2O95208 641 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 C6orf47O95873 294 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 EIF2S1P05198 315 aaKnown RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 FAM58BPP0C7Q3 252 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 SLC35G6P0C7Q6 338 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 GNSP15586 552 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 ATP5A1P25705 553 aaKnown RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 GCKP35557 465 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 HNRNPFP52597 415 aaKnown RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 HBA1P69905 142 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 RGS1Q08116 209 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 SLC14A1Q13336 389 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 AASDHQ4L235 1098 aaPredicted RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 FRMPD2BQ6IN97 320 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 OGFOD3Q6PK18 319 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 PROSER1Q86XN7 944 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 OR4N4Q8N0Y3 316 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 DTWD1Q8N5C7 304 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 ACOT4Q8N9L9 421 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 AVL9Q8NBF6 648 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 SRFBP1Q8NEF9 429 aaKnown RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 PNPT1Q8TCS8 783 aaKnown RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 CANT1Q8WVQ1 401 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 FAM120BQ96EK7 910 aaKnown RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 ZFYVE21Q9BQ24 234 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 MUC13Q9H3R2 512 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 COPS7BQ9H9Q2 264 aaPredicted RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 IL21RQ9HBE5 538 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 C5AR2Q9P296 337 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 ANKMY1Q9P2S6 941 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 AP3M1Q9Y2T2 418 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 AP4S1Q9Y587 144 aa10.47□□□□□ -0.73
SCG3-202ENST00000542355 ARHGEF17Q96PE2 2063 aaPredicted RBP10.47□□□□□ -0.73
SCG3-202ENST00000542355 A0A1W2PRB8 838 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 ELOVL7A1L3X0 281 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 AQP12BA6NM10 295 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 GSTA4O15217 222 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 BTN3A2P78410 334 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 SQSTM1Q13501 440 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 FXNQ16595 210 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 LRRC36Q1X8D7 754 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 NDUFAF5Q5TEU4 345 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 PMS2CLQ68D20 193 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 KLHL35Q6PF15 583 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 C17orf82Q86X59 251 aaPredicted RBP10.46□□□□□ -0.73
SCG3-202ENST00000542355 AQP12AQ8IXF9 295 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 PQLC1Q8N2U9 271 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 SLC25A45Q8N413 288 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 FAM47BQ8NA70 645 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 SVIPQ8NHG7 77 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 FIG4Q92562 907 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 RERGQ96A58 199 aaPredicted RBP10.46□□□□□ -0.73
SCG3-202ENST00000542355 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 TM4SF19Q96DZ7 209 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 RPF2Q9H7B2 306 aaKnown RBP10.46□□□□□ -0.73
SCG3-202ENST00000542355 TPT1P8Q9HAU6 139 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 POMT2Q9UKY4 750 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 KLK4Q9Y5K2 254 aa10.46□□□□□ -0.73
SCG3-202ENST00000542355 WASHC1A8K0Z3 465 aa10.46□□□□□ -0.74
SCG3-202ENST00000542355 H0YGG7 62 aa10.46□□□□□ -0.74
SCG3-202ENST00000542355 P2RX6O15547 441 aa10.46□□□□□ -0.74
SCG3-202ENST00000542355 HRO43593 1189 aa10.46□□□□□ -0.74
SCG3-202ENST00000542355 GMNNO75496 209 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms