RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TMIGD1Q6UXZ0 262 aa18.53■□□□□ 0.56
DDX11-220ENST00000542244 B3GNT7Q8NFL0 401 aa18.53■□□□□ 0.56
DDX11-220ENST00000542244 ANKRD7Q92527 254 aa18.53■□□□□ 0.56
DDX11-220ENST00000542244 NCLNQ969V3 563 aa18.53■□□□□ 0.56
DDX11-220ENST00000542244 GAL3ST3Q96A11 431 aa18.53■□□□□ 0.56
DDX11-220ENST00000542244 DPH5Q9H2P9 285 aa18.53■□□□□ 0.56
DDX11-220ENST00000542244 DEPPQ9NTK1 212 aa18.53■□□□□ 0.56
DDX11-220ENST00000542244 A0A0G2JMM0 328 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 A0A1W2PPB8 328 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 A0A1W2PRS3 328 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 KIR3DP1A8MWS1 328 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 FAM155BO75949 473 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 ZNF24P17028 368 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 GNAZP19086 355 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 FRA10AC1Q70Z53 315 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 UBE3DQ7Z6J8 389 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 MARVELD2Q8N4S9 558 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 F2RL3Q96RI0 385 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 DMRTA2Q96SC8 542 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 CLK4Q9HAZ1 481 aaKnown RBP18.52■□□□□ 0.56
DDX11-220ENST00000542244 PRTFDC1Q9NRG1 225 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 FBXW2Q9UKT8 454 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 SAR1BQ9Y6B6 198 aa18.52■□□□□ 0.56
DDX11-220ENST00000542244 DCHS2Q6V1P9 2916 aa18.52■□□□□ 0.55
DDX11-220ENST00000542244 A0A1B0GTH9 108 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 URADA6NGE7 173 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 CYR61O00622 381 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 HS6ST1O60243 411 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 ZNF354AO60765 605 aaPredicted RBP18.51■□□□□ 0.55
DDX11-220ENST00000542244 SH3BGRLO75368 114 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 ITGA10O75578 1167 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 CCDC166P0CW27 439 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 CD1DP15813 335 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 ABOP16442 354 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 HNMTP50135 292 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 CASP6P55212 293 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 RAB38P57729 211 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 GPX6P59796 221 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 SKP1P63208 163 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 DLG1Q12959 904 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 CBLBQ13191 982 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 DOC2AQ14183 400 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 TRADDQ15628 312 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 ADPRMQ3LIE5 342 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 CMPK2Q5EBM0 449 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 XKRXQ6PP77 449 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 ADAMTSL2Q86TH1 951 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 GHDCQ8N2G8 530 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 RPRMLQ8N4K4 120 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 HORMAD2Q8N7B1 307 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 NAPGQ99747 312 aaPredicted RBP18.51■□□□□ 0.55
DDX11-220ENST00000542244 DERL2Q9GZP9 239 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 SAYSD1Q9NPB0 183 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 PPIEQ9UNP9 301 aaKnown RBP18.51■□□□□ 0.55
DDX11-220ENST00000542244 MMACHCQ9Y4U1 282 aa18.51■□□□□ 0.55
DDX11-220ENST00000542244 PKDREJQ9NTG1 2253 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 RTCAO00442 366 aaKnown RBP18.5■□□□□ 0.55
DDX11-220ENST00000542244 PEX1O43933 1283 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 H2AFYO75367 372 aaKnown RBP18.5■□□□□ 0.55
DDX11-220ENST00000542244 PDE9AO76083 593 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 COX6B1P14854 86 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 CLCN2P51788 898 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 LIM2P55344 173 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 STXBP1P61764 594 aaKnown RBP18.5■□□□□ 0.55
DDX11-220ENST00000542244 NIPAL1Q6NVV3 410 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 MTFR2Q6P444 385 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 ABHD17CQ6PCB6 329 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 ZNF793Q6ZN11 406 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 RNF175Q8N4F7 328 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 OR52N2Q8NGI0 321 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 MTFMTQ96DP5 389 aaKnown RBP18.5■□□□□ 0.55
DDX11-220ENST00000542244 LURAP1Q96LR2 239 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 PRDM7Q9NQW5 492 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 DNAJC11Q9NVH1 559 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 WWOXQ9NZC7 414 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 GRHL1Q9NZI5 618 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 KCMF1Q9P0J7 381 aa18.5■□□□□ 0.55
DDX11-220ENST00000542244 TEP1Q99973 2627 aaKnown RBP18.5■□□□□ 0.55
DDX11-220ENST00000542244 G3V3Y1 287 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 CLEC3AO75596 197 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 CLDN14O95500 239 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 GGT5P36269 586 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 ID2Q02363 134 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 SLC13A2Q13183 592 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 NAA30Q147X3 362 aaPredicted RBP18.49■□□□□ 0.55
DDX11-220ENST00000542244 GPSM1Q86YR5 675 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 CYP4Z2PQ8N1L4 340 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 SNX31Q8N9S9 440 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 FAM98AQ8NCA5 519 aaKnown RBP18.49■□□□□ 0.55
DDX11-220ENST00000542244 OR2L5Q8NG80 312 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 EXT2Q93063 718 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 FAR2Q96K12 515 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 REXO4Q9GZR2 422 aaKnown RBP18.49■□□□□ 0.55
DDX11-220ENST00000542244 NT5DC2Q9H857 520 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 POPDC3Q9HBV1 291 aa18.49■□□□□ 0.55
DDX11-220ENST00000542244 TCRBV9S1A1TA0A576 114 aa18.48■□□□□ 0.55
DDX11-220ENST00000542244 CCDC188H7C350 402 aa18.48■□□□□ 0.55
DDX11-220ENST00000542244 RAD51CO43502 376 aa18.48■□□□□ 0.55
DDX11-220ENST00000542244 B3GALT2O43825 422 aa18.48■□□□□ 0.55
DDX11-220ENST00000542244 CDC40O60508 579 aaKnown RBP eCLIP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms