RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PRTGQ2VWP7 1150 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 C1orf185Q5T7R7 199 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 SLC9A4Q6AI14 798 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 FBXO42Q6P3S6 717 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 LRRC8BQ6P9F7 803 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 PAPD4Q6PIY7 484 aaKnown RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 MDGA2Q7Z553 956 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 C4orf33Q8N1A6 199 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 NAXEQ8NCW5 288 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 OR13C4Q8NGS5 318 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 M1APQ8TC57 530 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 COPS8Q99627 209 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 MMP25Q9NPA2 562 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 RAB6BQ9NRW1 208 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 CDC14AQ9UNH5 594 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 SLC12A4Q9UP95 1085 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 CHMP2BQ9UQN3 213 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 RUVBL1Q9Y265 456 aaKnown RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 PRSS21Q9Y6M0 314 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 USH1CQ9Y6N9 552 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 EML6Q6ZMW3 1958 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 A0A1W2PPM1 405 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 TCRBV7S3A2A0A539 114 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 ARHGEF33A8MVX0 844 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 HACD1B0YJ81 288 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 CFAP99D6REC4 459 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 G3V3Y1 287 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 TYROBPO43914 113 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 STK10O94804 968 aaKnown RBP9.09□□□□□ -0.95
CHFR-220ENST00000541817 TROVE2P10155 538 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHFR-220ENST00000541817 NEFHP12036 1026 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 KRT4P19013 534 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 CD9P21926 228 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 RBL1P28749 1068 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 RPA3P35244 121 aaPredicted RBP9.09□□□□□ -0.95
CHFR-220ENST00000541817 HLCSP50747 726 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 TNK1Q13470 666 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 SLC1A5Q15758 541 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 TYSND1Q2T9J0 566 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 SFT2D3Q587I9 215 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 ICE2Q659A1 982 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 HEPHL1Q6MZM0 1159 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 FAM47EQ6ZV65 393 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 SEM1Q6ZVN7 128 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 TRIM42Q8IWZ5 723 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 MCUQ8NE86 351 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 IPMKQ8NFU5 416 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 DCAKDQ8WVC6 231 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 ELMO1Q92556 727 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 LRRC39Q96DD0 335 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 CFAP36Q96G28 342 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 MRGPRX2Q96LB1 330 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 SPATA13Q96N96 652 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 CCL19Q99731 98 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 IQCGQ9H095 443 aaKnown RBP9.09□□□□□ -0.95
CHFR-220ENST00000541817 UBTD1Q9HAC8 227 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 ENAMQ9NRM1 1142 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 DEPPQ9NTK1 212 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 ABCF3Q9NUQ8 709 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 ACAD8Q9UKU7 415 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 TEX264Q9Y6I9 313 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
CHFR-220ENST00000541817 A0A0G2JMM0 328 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 A0A1W2PPB8 328 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 A0A1W2PRS3 328 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 KIR3DP1A8MWS1 328 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 RNF223E7ERA6 249 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 EDF1O60869 148 aaKnown RBP9.08□□□□□ -0.96
CHFR-220ENST00000541817 S1PR4O95977 384 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 CELA3AP09093 270 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 NQO1P15559 274 aaKnown RBP9.08□□□□□ -0.96
CHFR-220ENST00000541817 NFKB1P19838 968 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 TPSB2P20231 275 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 CD68P34810 354 aaPredicted RBP9.08□□□□□ -0.96
CHFR-220ENST00000541817 FDFT1P37268 417 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 PEX19P40855 299 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 SKIV2L2P42285 1042 aaKnown RBP9.08□□□□□ -0.96
CHFR-220ENST00000541817 TAS2R50P59544 299 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 ELF3P78545 371 aaPredicted RBP9.08□□□□□ -0.96
CHFR-220ENST00000541817 BNIP1Q12981 228 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 CAPRIN1Q14444 709 aaKnown RBP9.08□□□□□ -0.96
CHFR-220ENST00000541817 GRB7Q14451 532 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 TPSAB1Q15661 275 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 EXT1Q16394 746 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 CHRFAM7AQ494W8 412 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 GALNTL6Q49A17 601 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 PAOXQ6QHF9 649 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 PRSS41Q7RTY9 318 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 CCDC91Q7Z6B0 441 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 SLC26A11Q86WA9 606 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 SERPINA9Q86WD7 417 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 VRK3Q8IV63 474 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 CSNK1A1LQ8N752 337 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 ZFP62Q8NB50 900 aaPredicted RBP9.08□□□□□ -0.96
CHFR-220ENST00000541817 TNIP2Q8NFZ5 429 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 OR9A4Q8NGU2 314 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 PPP1R14CQ8TAE6 165 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 SLC44A1Q8WWI5 657 aa9.08□□□□□ -0.96
CHFR-220ENST00000541817 ZNF75CPQ92670 426 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms