RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 OXA1LQ15070 435 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 IFI44LQ53G44 452 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ARMCX4Q5H9R4 360 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 FAHD1Q6P587 224 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 FAM83HQ6ZRV2 1179 aaPredicted RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 SPATC1Q76KD6 591 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 TRAM1L1Q8N609 369 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 HRASLS5Q96KN8 279 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 VPS35Q96QK1 796 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 CUEDC1Q9NWM3 386 aaPredicted RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 C14orf119Q9NWQ9 140 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 GIN1Q9NXP7 522 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 QPCTLQ9NXS2 382 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF226Q9NYT6 803 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 DNAJC27Q9NZQ0 273 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 TAC3Q9UHF0 121 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 SLC5A10A0PJK1 596 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 H3BN98 237 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 WWP2O00308 870 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 LRRTM2O43300 516 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 SSX4O60224 188 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 POP7O75817 140 aaKnown RBP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 GASTP01350 101 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 CCL5P13501 91 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 PRPH2P23942 346 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 SLC6A11P48066 632 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 TPTEP56180 551 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 TAP2Q03519 686 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 CEACAM20Q6UY09 585 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 ZBTB8BQ8NAP8 495 aaPredicted RBP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 B3GNT7Q8NFL0 401 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 FBLIM1Q8WUP2 373 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF566Q969W8 418 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 C11orf24Q96F05 449 aaPredicted RBP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 MRGPRX3Q96LB0 322 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 HHIPQ96QV1 700 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 WDR12Q9GZL7 423 aaKnown RBP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 ZBP1Q9H171 429 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 CHST8Q9H2A9 424 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 PPIL1Q9Y3C6 166 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 TCF20Q9UGU0 1960 aaKnown RBP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 GADD45GO95257 159 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 ADH1AP07327 375 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 IRS1P35568 1242 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF805Q5CZA5 627 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 METTL2BQ6P1Q9 378 aaKnown RBP13.06□□□□□ -0.32
BNIP3-202ENST00000540159 IQCF1Q8N6M8 205 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 PLA2G15Q8NCC3 412 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 ATL1Q8WXF7 558 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 GABARAPL1Q9H0R8 117 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF556Q9HAH1 456 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 SLAMF7Q9NQ25 335 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 DMRT3Q9NQL9 472 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 SDK1Q7Z5N4 2213 aa13.06□□□□□ -0.32
BNIP3-202ENST00000540159 TRBV4-1A0A0J9YWV2 114 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 OTOL1A6NHN0 477 aaPredicted RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 PRRT4C9JH25 899 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 RGS5O15539 181 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 ADORA3P0DMS8 318 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 AZGP1P25311 298 aaKnown RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 CD40LGP29965 261 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 CNR2P34972 360 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 SOX3P41225 446 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 ASMTP46597 345 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 PRLHRP49683 370 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 MXD1Q05195 221 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 METTL3Q86U44 580 aaKnown RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 MMAAQ8IVH4 418 aaKnown RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 CHCHD4Q8N4Q1 142 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 DNAJC22Q8N4W6 341 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 OR5D16Q8NGK9 328 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 CXorf36Q9H7Y0 433 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 ANKRA2Q9H9E1 313 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF282Q9UDV7 671 aaPredicted RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 PAIP2BQ9ULR5 123 aaKnown RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 H7BY64 318 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 MOSPD3O75425 235 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 NTN1O95631 604 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 FURINP09958 794 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 SPNP16150 400 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF30P17039 623 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 VEZF1Q14119 521 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 TSTQ16762 297 aaKnown RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 SPDYE7PQ495Y7 208 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 SPIN4Q56A73 249 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF547Q8IVP9 402 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 AMER3Q8N944 861 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 Q8N9G6 341 aaPredicted RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 OR56A3Q8NH54 315 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 WDR36Q8NI36 951 aaKnown RBP13.05□□□□□ -0.32
BNIP3-202ENST00000540159 SLC38A4Q969I6 547 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 PRAP1Q96NZ9 151 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 OSGEPL1Q9H4B0 414 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms