RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ZNF385DQ9H6B1 395 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 COPS7BQ9H9Q2 264 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SLC39A1Q9NY26 324 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 DHCR7Q9UBM7 475 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NAALAD2Q9Y3Q0 740 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 COPG1Q9Y678 874 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 A0A0A6YYC8 382 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 GNG14A0A1W2PPG7 69 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TMEM8BA6NDV4 472 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZNF860A6NHJ4 632 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 I3L1I5 382 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 DNAJB6O75190 326 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CAPNS1P04632 268 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MAPK1P28482 360 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PTGR1Q14914 329 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TERF2Q15554 542 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MRM1Q6IN84 353 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CYB5D1Q6P9G0 228 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CYP20A1Q6UW02 462 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TTLL10Q6ZVT0 673 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MTDHQ86UE4 582 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PARP9Q8IXQ6 854 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SLC45A3Q96JT2 553 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TSSK3Q96PN8 268 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SERINC2Q96SA4 455 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NDC1Q9BTX1 674 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ROGDIQ9GZN7 287 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ANKHQ9HCJ1 492 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SAR1AQ9NR31 198 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MDC1Q14676 2089 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SGK494L7N484 410 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FCHO1O14526 889 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SCRG1O75711 98 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PRPS2P11908 318 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 IDO1P14902 403 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MAPK12P53778 367 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MAPK10P53779 464 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ARSFP54793 590 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SLAMF1Q13291 335 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 EIF3IQ13347 325 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 GSTA3Q16772 222 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 YOD1Q5VVQ6 348 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TMEM126BQ8IUX1 230 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SHISA5Q8N114 240 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 METTL27Q8N6F8 245 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CLHC1Q8NHS4 586 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 BRINP2Q9C0B6 783 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MYLK2Q9H1R3 596 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ACTL8Q9H568 366 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PISDQ9UG56 409 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZMIZ1Q9ULJ6 1067 aa17.92■□□□□ 0.46
TNFRSF1A-213ENST00000540022 A0A088AWK7 358 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ARHGAP10A1A4S6 786 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PLD2O14939 933 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ANKRD28O15084 1053 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 URB1O60287 2271 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CCDC22O60826 627 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NSA2O95478 260 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 JMJD7P0C870 316 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZNF10P21506 573 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ALAS2P22557 587 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 HNRNPH2P55795 449 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NME5P56597 212 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 OLR1P78380 273 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZNF763Q0D2J5 394 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CAMK2BQ13554 666 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 RUNX2Q13950 521 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 UBAP2LQ14157 1087 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SLC9A5Q14940 896 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 RHBDD2Q6NTF9 364 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SLC38A9Q8NBW4 561 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 OR5T3Q8NGG3 340 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 WDR36Q8NI36 951 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 C16orf78Q8WTQ4 265 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZCCHC14Q8WYQ9 949 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TM4SF18Q96CE8 201 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ACTR5Q9H9F9 607 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SDR39U1Q9NRG7 319 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NDOR1Q9UHB4 597 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SRPK3Q9UPE1 567 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TMEM184BQ9Y519 407 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PCDHB3Q9Y5E6 796 aa17.91■□□□□ 0.46
TNFRSF1A-213ENST00000540022 DSCR3O14972 297 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 B3GALT2O43825 422 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 RDH16O75452 317 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NTRK1P04629 796 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FAM58BPP0C7Q3 252 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ATP4BP51164 291 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TAS2R50P59544 299 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 RPS6KA2Q15349 733 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PDCD4Q53EL6 469 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 C3orf38Q5JPI3 329 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FOXR1Q6PIV2 292 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CLNKQ7Z7G1 428 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CPSF7Q8N684 471 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CDC26Q8NHZ8 85 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NUDT8Q8WV74 236 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms