RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CYBRD1Q53TN4 286 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 FAM109BQ6ICB4 259 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CBARPQ8N350 705 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 TSPEARQ8WU66 669 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 TRUB1Q8WWH5 349 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 P2RY12Q9H244 342 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 EHD1Q9H4M9 534 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 SDR39U1Q9NRG7 319 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 A0A1W2PQ72 361 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 UBE2QL1A1L167 161 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF821O75541 412 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 WISP3O95389 354 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 STSP08842 583 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ITIH1P19827 911 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 VIPR1P32241 457 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PREPP48147 710 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 SPINT3P49223 89 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PPP2R2BQ00005 443 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 GPRC6AQ5T6X5 926 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 POMZP3Q6PJE2 187 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CEACAM20Q6UY09 585 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 HMGN2P46Q86SG4 172 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ADIPOR2Q86V24 386 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PHYKPLQ8IUZ5 450 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PSD4Q8NDX1 1056 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CXorf40BQ96DE9 158 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 RIOK2Q9BVS4 552 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 FAIMQ9NVQ4 179 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CNOT11Q9UKZ1 510 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 POLR1DQ9Y2S0 133 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 RPL36Q9Y3U8 105 aaKnown RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 TLR4O00206 839 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PLOD2O00469 737 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 BCAS1O75363 584 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CYP17A1P05093 508 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 HLA-EP13747 358 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PORP16435 677 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CPN2P22792 545 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 LHCGRP22888 699 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 RELAQ04206 551 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ANKDD1AQ495B1 522 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 NOXRED1Q6NXP6 359 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CCBE1Q6UXH8 406 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 TICAM1Q8IUC6 712 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 GALNT12Q8IXK2 581 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ADGRG5Q8IZF4 528 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
TRAF1-202ENST00000540010 DNAJB8Q8NHS0 232 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 LKAAEAR1Q8TD35 194 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 WFIKKN2Q8TEU8 576 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 KLHL6Q8WZ60 621 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 SLC30A2Q9BRI3 323 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 CHIAQ9BZP6 476 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 ERVK13-1Q9NX77 482 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 MS4A12Q9NXJ0 267 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 PCTPQ9UKL6 214 aa9.6□□□□□ -0.87
TRAF1-202ENST00000540010 DOCK6Q96HP0 2047 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 H0YJX3 145 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 DYRK3O43781 588 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 ORC5O43913 435 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 ARHGEF15O94989 841 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 NPPAP01160 153 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 SLC2A2P11168 524 aaPredicted RBP9.59□□□□□ -0.87
TRAF1-202ENST00000540010 RPS3P23396 243 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAF1-202ENST00000540010 ETV3P41162 512 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 TAS2R50P59544 299 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 CLCA4Q14CN2 919 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 AGTRAPQ6RW13 159 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 ADGRD2Q7Z7M1 963 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 FAM124AQ86V42 546 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 DNASE1L2Q92874 299 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 ALPK1Q96QP1 1244 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 PDCD10Q9BUL8 212 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 LMAN2LQ9H0V9 348 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 TM9SF3Q9HD45 589 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 ELOVL2Q9NXB9 296 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 VAPAQ9P0L0 249 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 TMEM181Q9P2C4 612 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 USP22Q9UPT9 525 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 COL4A6Q14031 1691 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 CHURC1-FNTBB4DL54 471 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 GNB5O14775 395 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 EEDO75530 441 aaKnown RBP9.59□□□□□ -0.87
TRAF1-202ENST00000540010 LCKP06239 509 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF30P17039 623 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 NUP62P37198 522 aaPredicted RBP9.59□□□□□ -0.87
TRAF1-202ENST00000540010 RPS13P62277 151 aaKnown RBP9.59□□□□□ -0.87
TRAF1-202ENST00000540010 FCHO2Q0JRZ9 810 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 VMACQ2NL98 169 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 WSCD2Q2TBF2 565 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 C9orf50Q5SZB4 431 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 PPP2R2DQ66LE6 453 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 THOC7Q6I9Y2 204 aaKnown RBP9.59□□□□□ -0.87
TRAF1-202ENST00000540010 TMEM53Q6P2H8 277 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 RETREG3Q86VR2 466 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 CADM2Q8N3J6 435 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 POMGNT2Q8NAT1 580 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 KLK6Q92876 244 aa9.59□□□□□ -0.87
TRAF1-202ENST00000540010 FARSBQ9NSD9 589 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms