RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 C22orf39Q6P5X5 142 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 KLHL17Q6TDP4 642 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 TMC5Q6UXY8 1006 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 HS6ST3Q8IZP7 471 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 FAM46DQ8NEK8 389 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 GPR156Q8NFN8 814 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 OR4K1Q8NGD4 311 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 WDR36Q8NI36 951 aaKnown RBP9.26□□□□□ -0.93
CDH13-204ENST00000539548 TP53INP1Q96A56 240 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 MED8Q96G25 268 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 LMLNQ96KR4 655 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 SNX18Q96RF0 628 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
CDH13-204ENST00000539548 RACGAP1Q9H0H5 632 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 SMURF1Q9HCE7 757 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 ZNF334Q9HCZ1 680 aaPredicted RBP9.26□□□□□ -0.93
CDH13-204ENST00000539548 CCDC177Q9NQR7 707 aaPredicted RBP9.26□□□□□ -0.93
CDH13-204ENST00000539548 ASAH2Q9NR71 780 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 C14orf119Q9NWQ9 140 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 ERVK13-1Q9NX77 482 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 CD84Q9UIB8 345 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 ZNF221Q9UK13 617 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 TBC1D24Q9ULP9 559 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 HS3ST2Q9Y278 367 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 N6AMT1Q9Y5N5 214 aa9.26□□□□□ -0.93
CDH13-204ENST00000539548 HELZP42694 1942 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 DSPPQ9NZW4 1301 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 A0A1W2PQ67 120 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 FADS2P1A8MWK0 482 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 IDH3BO43837 385 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 SSX4O60224 188 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 MTX2O75431 263 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 GASTP01350 101 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 CATP04040 527 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 ARAFP10398 606 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 ENDOUP21128 410 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 CSTF2P33240 577 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH13-204ENST00000539548 CNR2P34972 360 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 RPS19P39019 145 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 RPL3P39023 403 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 SNRPGP62308 76 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 POLR2LP62875 67 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 ZNF763Q0D2J5 394 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 GPR50Q13585 617 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 PDE7AQ13946 482 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 TCTN1Q2MV58 587 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 MEDAGQ5VYS4 303 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 MED27Q6P2C8 311 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 SLCO4C1Q6ZQN7 724 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH13-204ENST00000539548 SLC30A8Q8IWU4 369 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 OR8H2Q8N162 312 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 AQP11Q8NBQ7 271 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 TIFAQ96CG3 184 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 REPS1Q96D71 796 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 IGSF21Q96ID5 467 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 OPALINQ96PE5 141 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 ASPNQ9BXN1 380 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 ROGDIQ9GZN7 287 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 FAM83DQ9H4H8 585 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 ZDHHC6Q9H6R6 413 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 HHATLQ9HCP6 504 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 OGDHLQ9ULD0 1010 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 LSM2Q9Y333 95 aaKnown RBP9.25□□□□□ -0.93
CDH13-204ENST00000539548 SNX8Q9Y5X2 465 aa9.25□□□□□ -0.93
CDH13-204ENST00000539548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.24□□□□□ -0.93
CDH13-204ENST00000539548 TRBC2A0A5B9 178 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 SLC35F4A4IF30 521 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 FOXE1O00358 373 aaPredicted RBP9.24□□□□□ -0.93
CDH13-204ENST00000539548 QSOX1O00391 747 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 PRRG1O14668 218 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ZNF197O14709 1029 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 NPC1O15118 1278 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 BNIP3LO60238 219 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 KRT75O95678 551 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 FURINP09958 794 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ZNF30P17039 623 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 IMPA1P29218 277 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 EPHB3P54753 998 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 DOC2BQ14184 412 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 NCF4Q15080 339 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 CCSMST1Q4G0I0 132 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 CYP27C1Q4G0S4 372 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ATAD3CQ5T2N8 411 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 DPY19L3Q6ZPD9 716 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 NRARPQ7Z6K4 114 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 SCAMP4Q969E2 229 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 VPS35Q96QK1 796 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 PKP4Q99569 1192 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 CNPPD1Q9BV87 410 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 NMNAT1Q9HAN9 279 aaPredicted RBP9.24□□□□□ -0.93
CDH13-204ENST00000539548 TAS2R9Q9NYW1 312 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 SEC14L4Q9UDX3 406 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 NDOR1Q9UHB4 597 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 ANGPT4Q9Y264 503 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 KCNE2Q9Y6J6 123 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 PLXNA2O75051 1894 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 TET1Q8NFU7 2136 aa9.24□□□□□ -0.93
CDH13-204ENST00000539548 A0A1W2PQ45 241 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms