RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 OR8J2Q8NGG1 315 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 OR5AK3PQ8NH89 298 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 CSGALNACT1Q8TDX6 532 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 MRGPRX3Q96LB0 322 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ABCB9Q9NP78 766 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ACSL6Q9UKU0 697 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SAMD4AQ9UPU9 718 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 GSTM1P09488 218 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SDHBP21912 280 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 MAPK1P28482 360 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 UBE3AQ05086 875 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 LEXMQ3ZCV2 418 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 AGAP6Q5VW22 663 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 LIPJQ5W064 366 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 AGTRAPQ6RW13 159 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 PGBD3Q8N328 593 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SYNPOQ8N3V7 929 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 OR6F1Q8NGZ6 308 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF566Q969W8 418 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 TP53INP1Q96A56 240 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 AGAP4Q96P64 663 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 GPATCH2Q9NW75 528 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SH3BP4Q9P0V3 963 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 CLEC2DQ9UHP7 191 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 DUSP12Q9UNI6 340 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 KLHL20Q9Y2M5 609 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 C1orf226A1L170 272 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 WASH3PC4AMC7 463 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 H3BQ06 376 aaPredicted RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 TNFRSF11BO00300 401 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 PCDH7O60245 1069 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SOX14O95416 240 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ACRP10323 421 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 IMPA1P29218 277 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 TNFSF8P32971 234 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 CRATP43155 626 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SLC15A1P46059 708 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 RGS6P49758 472 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SPIBQ01892 262 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 HKDC1Q2TB90 917 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 PROX2Q3B8N5 592 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ARMC4Q5T2S8 1044 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF852Q6ZMS4 543 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF605Q86T29 641 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 C1orf52Q8N6N3 182 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 DTX3Q8N9I9 347 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 OR4K1Q8NGD4 311 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 ASZ1Q8WWH4 475 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 TBC1D20Q96BZ9 403 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 C7orf34Q96L11 122 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 PKP4Q99569 1192 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 TPT1P8Q9HAU6 139 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 IMPAD1Q9NX62 359 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 TBC1D24Q9ULP9 559 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 CENPXA8MT69 81 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 KPNA5O15131 536 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 CSF2RAP15509 400 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 VIPR1P32241 457 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 HTR3AP46098 478 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 RAB25P57735 213 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 SRSF11Q05519 484 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 CDC20Q12834 499 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 KEAP1Q14145 624 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 TEAD2Q15562 447 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF385BQ569K4 471 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 LY6G5CQ5SRR4 150 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 IER5LQ5T953 404 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 ZDHHC20Q5W0Z9 365 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 PAQR6Q6TCH4 344 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 MSANTD1Q6ZTZ1 278 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 CBLL1Q75N03 491 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 SLC46A3Q7Z3Q1 461 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 HMGN2P46Q86SG4 172 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 LAX1Q8IWV1 398 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 NAGSQ8N159 534 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 ELMOD1Q8N336 334 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 B3GNT7Q8NFL0 401 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 WDR36Q8NI36 951 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 IRF7Q92985 503 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 DHRS1Q96LJ7 313 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 RNF208Q9H0X6 261 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 GIMAP4Q9NUV9 329 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 TAS2R9Q9NYW1 312 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 CLDN24A6NM45 220 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 HIDE1A8MVS5 230 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 CPNE3O75131 537 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 EPN2O95208 641 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 KCNJ10P78508 379 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 CSTF3Q12996 717 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 PNCKQ6P2M8 343 aa12.03□□□□□ -0.48
SFSWAP-208ENST00000539506 OTOP2Q7RTS6 562 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms