RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 MROH9Q5TGP6 573 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TRIM40Q6P9F5 258 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 LRRC70Q7Z2Q7 622 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 OR2L5Q8NG80 312 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 KCTD4Q8WVF5 259 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NXNL1Q96CM4 212 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 WDR34Q96EX3 536 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 F2RL3Q96RI0 385 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NPLQ9BXD5 320 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PRTFDC1Q9NRG1 225 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PNO1Q9NRX1 252 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ZDHHC18Q9NUE0 388 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SEC14L3Q9UDX4 400 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 A0A088AWK7 358 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TGFBR3LH3BV60 316 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 KERAO60938 352 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 URI1O94763 535 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MYO1DO94832 1006 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CD46P15529 392 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF10P21506 573 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PPP2R1BP30154 601 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MSH2P43246 934 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PER3P56645 1201 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SLC13A2Q13183 592 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LAPTM5Q13571 262 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 UAP1Q16222 522 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 HIST2H2ACQ16777 129 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ADPRMQ3LIE5 342 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PAGE2BQ5JRK9 111 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 UBAP2Q5T6F2 1119 aaKnown RBP17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF787Q6DD87 383 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 HIST2H2AA3Q6FI13 130 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ABHD17CQ6PCB6 329 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CLNKQ7Z7G1 428 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SCUBE1Q8IWY4 988 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LGI4Q8N135 537 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SCMH1Q96GD3 660 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SERINC2Q96SA4 455 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ATOH8Q96SQ7 321 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CSF3RQ99062 836 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 COPS7BQ9H9Q2 264 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LRFN1Q9P244 771 aa17.83■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CROCCQ5TZA2 2017 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TRBV11-1A0A0K0K1C0 115 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 A0A1B0GUH1 482 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CLDN4O14493 209 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZG16O60844 167 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SH3BGRLO75368 114 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NEURL1O76050 574 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PCNAP12004 261 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 EEF1DP29692 281 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 HPDP32754 393 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MTTPP55157 894 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 LIM2P55344 173 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MLF1P58340 268 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 GALNTL5Q7Z4T8 443 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 THAP3Q8WTV1 239 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 DEFB126Q9BYW3 111 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TSPAN10Q9H1Z9 355 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 OPTCQ9UBM4 332 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ACOT9Q9Y305 439 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PCDHGB6Q9Y5F9 930 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CLDN16Q9Y5I7 305 aa17.82■□□□□ 0.44
TNFRSF1A-212ENST00000539372 A0A087X1B8 175 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TRGV8A0A0C4DH27 118 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MYOCOSA0A1B0GUC4 107 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 HMX2A2RU54 273 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SP1P08047 785 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 HSD17B7P56937 341 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TGM3Q08188 693 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TBCCQ15814 346 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MAPKAPK3Q16644 382 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 UBE3DQ7Z6J8 389 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CENPLQ8N0S6 344 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 HORMAD2Q8N7B1 307 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 TMEM178AQ8NBL3 297 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 APCDD1LQ8NCL9 501 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 B3GNT7Q8NFL0 401 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ADAMTS18Q8TE60 1221 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 UBTD2Q8WUN7 234 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZNF592Q92610 1267 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 PRDM7Q9NQW5 492 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SNX15Q9NRS6 342 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 NINJ2Q9NZG7 142 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SH3BGRL2Q9UJC5 107 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 DAPP1Q9UN19 280 aa17.81■□□□□ 0.44
TNFRSF1A-212ENST00000539372 K7EPI3 171 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 RTCAO00442 366 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CYR61O00622 381 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SLC25A12O75746 678 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 C2P06681 752 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 MTHFD2P13995 350 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 DCTP40126 519 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CYB561P49447 251 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 CLCN2P51788 898 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 ZRSR2Q15696 482 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 WHAMMP3Q1A5X7 153 aa17.8■□□□□ 0.44
TNFRSF1A-212ENST00000539372 SLC25A25Q6KCM7 469 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms