RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 PPIEQ9UNP9 301 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 MMACHCQ9Y4U1 282 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 MYO18BQ8IUG5 2567 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 RELNP78509 3460 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 TGFBR3LH3BV60 316 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 GOLGA8RI6L899 631 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 PLIN3O60664 434 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 GLRA3O75311 464 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 ETHE1O95571 254 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 TGFB1P01137 390 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 BSGP35613 385 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 CD97P48960 835 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 HNRNPFP52597 415 aaKnown RBP12.88□□□□□ -0.35
CD9-208ENST00000538834 MTTPP55157 894 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 LIM2P55344 173 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 RAB38P57729 211 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 BTG2P78543 158 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 ZRSR2Q15696 482 aaKnown RBP12.88□□□□□ -0.35
CD9-208ENST00000538834 TNFAIP8L3Q5GJ75 292 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 LETMD1Q6P1Q0 360 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 TRIM40Q6P9F5 258 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 RPS27LQ71UM5 84 aaKnown RBP12.88□□□□□ -0.35
CD9-208ENST00000538834 TRABD2AQ86V40 505 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 PTRH1Q86Y79 214 aaKnown RBP12.88□□□□□ -0.35
CD9-208ENST00000538834 IQCKQ8N0W5 287 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 ARMC10Q8N2F6 343 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 TMEM52Q8NDY8 209 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 NFAM1Q8NET5 270 aaPredicted RBP12.88□□□□□ -0.35
CD9-208ENST00000538834 OR2W6PQ8NHA6 318 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 TSLPQ969D9 159 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 KCNC2Q96PR1 638 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 LMF1Q96S06 567 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 YIPF2Q9BWQ6 316 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 ACTR8Q9H981 624 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 ZNF160Q9HCG1 818 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 NECTIN3Q9NQS3 549 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.88□□□□□ -0.35
CD9-208ENST00000538834 V9GYY5 206 aaPredicted RBP12.88□□□□□ -0.35
CD9-208ENST00000538834 EXPH5Q8NEV8 1989 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 GTF3C1Q12789 2109 aa12.88□□□□□ -0.35
CD9-208ENST00000538834 NSG1A0A0A6YYJ2 146 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 A0A0G2JN53 185 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 SERTM1A2A2V5 107 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 A6NL46 340 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 PLPP1O14494 284 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 ICAM2P13598 275 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 HIST1H1TP22492 207 aaPredicted RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 JAK1P23458 1154 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 PTX3P26022 381 aaPredicted RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 SLCO1A2P46721 670 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 GPR143P51810 404 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 PLA2G16P53816 162 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 CDH13P55290 713 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 HSD17B7P56937 341 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 DNAJB13P59910 316 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 IGLV3-21P80748 117 aaPredicted RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 CLCQ05315 142 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 EEF1A2Q05639 463 aaKnown RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 CPSF6Q16630 551 aaKnown RBP eCLIP12.87□□□□□ -0.35
CD9-208ENST00000538834 FAAH2Q6GMR7 532 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 OR4C11Q6IEV9 310 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 JMJD6Q6NYC1 403 aaPredicted RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 ZYG11AQ6WRX3 759 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 Q6ZS92 163 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 CHSY3Q70JA7 882 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 ZNF605Q86T29 641 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 SLC22A9Q8IVM8 553 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 PARP9Q8IXQ6 854 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 KBTBD2Q8IY47 623 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 ZCCHC7Q8N3Z6 543 aaKnown RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 ACOT4Q8N9L9 421 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 BANPQ8N9N5 519 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 OR4F6Q8NGB9 312 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 M1APQ8TC57 530 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 ELP5Q8TE02 316 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 ADAMTS18Q8TE60 1221 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 CDK15Q96Q40 435 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 ZNF382Q96SR6 550 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 BARD1Q99728 777 aaKnown RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 ROGDIQ9GZN7 287 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 OR51B5Q9H339 312 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 GSTO2Q9H4Y5 243 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
CD9-208ENST00000538834 PRDM9Q9NQV7 894 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 GRID1Q9ULK0 1009 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 ANGPTL3Q9Y5C1 460 aa12.87□□□□□ -0.35
CD9-208ENST00000538834 A0A088AWK7 358 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 A0A0A6YYD5 115 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 IGHV3-20A0A0C4DH32 117 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 RTCAO00442 366 aaKnown RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 B3GALT2O43825 422 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 PRMT3O60678 531 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 DPM1O60762 260 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 SEMA3DO95025 777 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 TUBBP07437 444 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 CELA2AP08217 269 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 ITGAMP11215 1152 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 TAC1P20366 129 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms