RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CHI3L1P36222 383 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 PLA2G16P53816 162 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 CXCR4P61073 352 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 CDK6Q00534 326 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 IL1RL1Q01638 556 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 KIAA1614Q5VZ46 1190 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 CCDC71Q8IV32 467 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 ATG16L2Q8NAA4 619 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 DTNBP1Q96EV8 351 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 PRAP1Q96NZ9 151 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 NODALQ96S42 347 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 PITHD1Q9GZP4 211 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 CXorf36Q9H7Y0 433 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 WBP11Q9Y2W2 641 aaKnown RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 PCDHGB1Q9Y5G3 927 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 GMPPBQ9Y5P6 360 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 PRR19A6NJB7 356 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 LINC01565O15544 149 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 KRT75O95678 551 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 ACP5P13686 325 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 ITIH1P19827 911 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 UQCRC2P22695 453 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 SERPINB1P30740 379 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 GDI1P31150 447 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 KIR2DL1P43626 348 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 RXRGP48443 463 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 MAPK12P53778 367 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 EMP3P54852 163 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 HPCAP84074 193 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 SHHQ15465 462 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 IFI44LQ53G44 452 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 FAM180BQ6P0A1 224 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 PARM1Q6UWI2 310 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 SPPL2AQ8TCT8 520 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 FGF14Q92915 247 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 FKBP10Q96AY3 582 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 INSM2Q96T92 566 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 RPP25Q9BUL9 199 aaKnown RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 GABARAPL3Q9BY60 117 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 ABCG4Q9H172 646 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 RAD21L1Q9H4I0 556 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 DUSP21Q9H596 190 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 THSD1Q9NS62 852 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 KIF17Q9P2E2 1029 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 AASSQ9UDR5 926 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 MYO10Q9HD67 2058 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 IGKV1-8A0A0C4DH67 115 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 PTGES3LE9PB15 166 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 ADAMDEC1O15204 470 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 CAPN5O15484 640 aaPredicted RBP13.36□□□□□ -0.27
LIMK1-208ENST00000538333 FMO3P31513 532 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 SOAT1P35610 550 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 STT3AP46977 705 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 SOX9P48436 509 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 PRIM2P49643 509 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 SLC35A2P78381 396 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 NPRL3Q12980 569 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 ITPRIPL2Q3MIP1 535 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 ZC3H7AQ8IWR0 971 aaKnown RBP13.36□□□□□ -0.27
LIMK1-208ENST00000538333 OR4C15Q8NGM1 316 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 KLK6Q92876 244 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 FAM131CQ96AQ9 280 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 ELSPBP1Q96BH3 223 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 C12orf66Q96MD2 445 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 APOL4Q9BPW4 351 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 TIMM29Q9BSF4 260 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 C1QTNF2Q9BXJ5 285 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 RUBCNLQ9H714 662 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 PHPT1Q9NRX4 125 aaPredicted RBP13.36□□□□□ -0.27
LIMK1-208ENST00000538333 CCDC88CQ9P219 2028 aa13.36□□□□□ -0.27
LIMK1-208ENST00000538333 K7EQS6 105 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 LATO43561 262 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 DNAJB5O75953 348 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 CD247P20963 164 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 CD6P30203 668 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 FRKP42685 505 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 OR1E2P47887 323 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 CSNK1G2P78368 415 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 NFATC3Q12968 1075 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 DCTN2Q13561 401 aaKnown RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 MAD2L1BPQ15013 274 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 AP1ARQ63HQ0 302 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 PAGE2Q7Z2X7 111 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 UBE3DQ7Z6J8 389 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 RAB2BQ8WUD1 216 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF300Q96RE9 604 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF347Q96SE7 839 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 CSF3RQ99062 836 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 GPN2Q9H9Y4 310 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-208ENST00000538333 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
LIMK1-208ENST00000538333 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms