RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 IL21RQ9HBE5 538 aa3.42□□□□□ -1.86
PTPN22-211ENST00000538253 CUTCQ9NTM9 273 aa3.42□□□□□ -1.86
PTPN22-211ENST00000538253 NOP53Q9NZM5 478 aaKnown RBP3.42□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF282Q9UDV7 671 aaPredicted RBP3.42□□□□□ -1.86
PTPN22-211ENST00000538253 TAC3Q9UHF0 121 aa3.42□□□□□ -1.86
PTPN22-211ENST00000538253 BAG5Q9UL15 447 aa3.42□□□□□ -1.86
PTPN22-211ENST00000538253 ICKQ9UPZ9 632 aa3.42□□□□□ -1.86
PTPN22-211ENST00000538253 ERVK-19Q9WJR5 959 aa3.42□□□□□ -1.86
PTPN22-211ENST00000538253 ENTPD4Q9Y227 616 aa3.42□□□□□ -1.86
PTPN22-211ENST00000538253 RUVBL1Q9Y265 456 aaKnown RBP3.42□□□□□ -1.86
PTPN22-211ENST00000538253 FANCMQ8IYD8 2048 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ESYT3A0FGR9 886 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 DCDC2BA2VCK2 349 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 FITM1A5D6W6 292 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 NPEPPSL1A6NEC2 478 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 E7ENX8 843 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 H0YIV9 168 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 PPM1DO15297 605 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 KLK8O60259 260 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ULK1O75385 1050 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 WFS1O76024 890 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 UROSP10746 265 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 TYRP1P17643 537 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ARNTP27540 789 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 LCN1P31025 176 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 HPCAL1P37235 193 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 SCTRP47872 440 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 PSMD4P55036 377 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 SSTP61278 116 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 HERVK_113P63132 956 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 PPP2R2BQ00005 443 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 TAP2Q03519 686 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ACSM2AQ08AH3 577 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 LSAMPQ13449 338 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 DNASE1L3Q13609 305 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 TP53BP2Q13625 1128 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 GTF2H2Q13888 395 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 CLCA4Q14CN2 919 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 HEPACAMQ14CZ8 416 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 RPS6KA2Q15349 733 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 FAM209BQ5JX69 171 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 SNAP47Q5SQN1 464 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ACSM2BQ68CK6 577 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 GTF2H2CQ6P1K8 395 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 B3GNT6Q6ZMB0 384 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 MED25Q71SY5 747 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 CPLX4Q7Z7G2 160 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ADGRF3Q8IZF5 1079 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 CLYBLQ8N0X4 340 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 KDF1Q8NAX2 398 aaPredicted RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 OR5AR1Q8NGP9 310 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 LRRN4Q8WUT4 740 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF480Q8WV37 535 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 DAZLQ92904 295 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 RHBDF1Q96CC6 855 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 L3HYPDHQ96EM0 354 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ANKRD27Q96NW4 1050 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ERVK-6Q9BXR3 956 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ULBP3Q9BZM4 244 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 EPS8L2Q9H6S3 715 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ALG9Q9H6U8 611 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 THUMPD1Q9NXG2 353 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 MRPL39Q9NYK5 338 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 STOML1Q9UBI4 398 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 BAIAP2L1Q9UHR4 511 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 PCDHGB4Q9UN71 923 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 FARSAQ9Y285 508 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF451Q9Y4E5 1061 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 MAP4K5Q9Y4K4 846 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 MYO18AQ92614 2054 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 OR1F1O43749 312 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 IDH3BO43837 385 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 OR1I1O60431 355 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 DPM1O60762 260 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 SUPT7LO94864 414 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 ESRRBO95718 433 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 PGRP06401 933 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 NTSP30990 170 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 CCR10P46092 362 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 BDKRB1P46663 353 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 GPX6P59796 221 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 DCAF7P61962 342 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 IL1RL1Q01638 556 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 CHIT1Q13231 466 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 PRKG2Q13237 762 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 STX3Q13277 289 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 SLC9A5Q14940 896 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 TSNQ15631 228 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 CCDC6Q16204 474 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 MAPKAPK3Q16644 382 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 PTCHD3Q3KNS1 767 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 LSM12Q3MHD2 195 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 TECRLQ5HYJ1 363 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 C3orf38Q5JPI3 329 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 HLA-DQA1Q5Y7H0 255 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 OR52E8Q6IFG1 317 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 TRMT10BQ6PF06 316 aaKnown RBP3.41□□□□□ -1.86
PTPN22-211ENST00000538253 RFLNAQ6ZTI6 216 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 BEND4Q6ZU67 534 aa3.41□□□□□ -1.86
PTPN22-211ENST00000538253 TMPRSS9Q7Z410 1059 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms