RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 UQCRC1P31930 480 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 RAB28P51157 221 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 ZMYND11Q15326 602 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 TPRG1LQ5T0D9 272 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 ZNF852Q6ZMS4 543 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 MSANTD1Q6ZTZ1 278 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 TMED4Q7Z7H5 227 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 TDRPQ86YL5 185 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 PLCZ1Q86YW0 608 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 IQCKQ8N0W5 287 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 C2CD4AQ8NCU7 369 aaPredicted RBP10.79□□□□□ -0.68
LINC00346-201ENST00000538077 PLEKHO2Q8TD55 490 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 SAMD11Q96NU1 681 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 SLC5A7Q9GZV3 580 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 RGPD1P0DJD0 1748 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 PFKLP17858 780 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 AP1S2P56377 157 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 GALK2Q01415 458 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 ST3GAL3Q11203 375 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 IRF5Q13568 498 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 IER5LQ5T953 404 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 DRICH1Q6PGQ1 229 aaPredicted RBP10.79□□□□□ -0.68
LINC00346-201ENST00000538077 CCDC80Q76M96 950 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 NINJ1Q92982 152 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 TEX46H3BTG2 121 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 PLOD2O00469 737 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 CAPN5O15484 640 aaPredicted RBP10.79□□□□□ -0.68
LINC00346-201ENST00000538077 RCBTB2O95199 551 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 APOC1P02654 83 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 GRIA2P42262 883 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 RPS3AP61247 264 aaKnown RBP10.79□□□□□ -0.68
LINC00346-201ENST00000538077 TBPL1P62380 186 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 FIGNL1Q6PIW4 674 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 RNF111Q6ZNA4 994 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 MTG2Q9H4K7 406 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 SMURF2Q9HAU4 748 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.79□□□□□ -0.68
LINC00346-201ENST00000538077 NLGN3Q9NZ94 848 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 NUP50Q9UKX7 468 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 WDR45Q9Y484 360 aa10.79□□□□□ -0.68
LINC00346-201ENST00000538077 SCN11AQ9UI33 1791 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 EIF2S3P41091 472 aaKnown RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 RABL3Q5HYI8 236 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 PLD6Q8N2A8 252 aaKnown RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CSNK1A1LQ8N752 337 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CANT1Q8WVQ1 401 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 DGCR14Q96DF8 476 aaKnown RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 ZNF641Q96N77 438 aaPredicted RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 LOC100130705A0A1B0GUX0 176 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 OR14I1A6ND48 311 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SYPP08247 313 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SOX2P48431 317 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CTBP2P56545 445 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TSPAN33Q86UF1 283 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SIAH1Q8IUQ4 282 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 AVL9Q8NBF6 648 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 GNPDA2Q8TDQ7 276 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 GLYATL1Q969I3 302 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 F2RL3Q96RI0 385 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 LMAN1LQ9HAT1 526 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SSU72Q9NP77 194 aaKnown RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 POFUT2Q9Y2G5 429 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 IFT52Q9Y366 437 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 AHDC1Q5TGY3 1603 aaPredicted RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SLC33A1O00400 549 aaPredicted RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SOCS2O14508 198 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SLC2A2P11168 524 aaPredicted RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CEBPBP17676 345 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CYBRD1Q53TN4 286 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TMEM25Q86YD3 366 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TRAM1L1Q8N609 369 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 DENND6BQ8NEG7 585 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CXorf21Q9HAI6 301 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TPT1P8Q9HAU6 139 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 C8orf4Q9NR00 106 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 PCP4L1A6NKN8 68 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TIMP1P01033 207 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CKMT2P17540 419 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CYP1B1Q16678 543 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 GXYLT1Q4G148 440 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SLC35B2Q8TB61 432 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TRMT10AQ8TBZ6 339 aaKnown RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 STON2Q8WXE9 905 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TMEM41AQ96HV5 264 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 KCTD7Q96MP8 289 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 ZNF226Q9NYT6 803 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 GSKIPQ9P0R6 139 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CD207Q9UJ71 328 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 MEMO1Q9Y316 297 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 COQ4Q9Y3A0 265 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
LINC00346-201ENST00000538077 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 KCNJ13O60928 360 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 CREG1O75629 220 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 SOX30O94993 753 aa10.78□□□□□ -0.68
LINC00346-201ENST00000538077 EBLN1P0CF75 366 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms