RNA–Protein interactions for RNA: ENST00000537369.2

TRAV8-5-201, Transcript of T cell receptor alpha variable 8-5 (pseudogene), humanhuman

BASIC

Gene TRAV8-5, Length 341 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-5-201ENST00000537369 PTCD3Q96EY7 689 aaKnown RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 C11orf24Q96F05 449 aaPredicted RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 PEX11GQ96HA9 241 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 HSH2DQ96JZ2 352 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 FRMD6Q96NE9 622 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 ZIM3Q96PE6 472 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 HBEGFQ99075 208 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 SMAD5Q99717 465 aaKnown RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 MAPKAP1Q9BPZ7 522 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 AIF1LQ9BQI0 150 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 MECRQ9BV79 373 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 NTMT1Q9BV86 223 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 C20orf27Q9GZN8 174 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 PCBD2Q9H0N5 130 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 ING2Q9H160 280 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 OR51B5Q9H339 312 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 C12orf49Q9H741 205 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 NOL11Q9H8H0 719 aaKnown RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 ZNF395Q9H8N7 513 aaPredicted RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 ZFAND3Q9H8U3 227 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 IPPKQ9H8X2 491 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 DMRT3Q9NQL9 472 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 ZNF71Q9NQZ8 489 aaPredicted RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 TXLNGQ9NUQ3 528 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 MKS1Q9NXB0 559 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 TXNDC16Q9P2K2 825 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 PSMC3IPQ9P2W1 217 aaPredicted RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 TRPC4Q9UBN4 977 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 ZNF282Q9UDV7 671 aaPredicted RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 KCND3Q9UK17 655 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 FBXL4Q9UKA2 621 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 EXO1Q9UQ84 846 aaKnown RBP4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 POLHQ9Y253 713 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 MAN2B2Q9Y2E5 1009 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 TSC22D4Q9Y3Q8 395 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 CCL27Q9Y4X3 112 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 PTGDR2Q9Y5Y4 395 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 KCNE2Q9Y6J6 123 aa4.09□□□□□ -1.75
TRAV8-5-201ENST00000537369 NCOA6Q14686 2063 aaPredicted RBP4.09□□□□□ -1.76
TRAV8-5-201ENST00000537369 GCN1Q92616 2671 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 A0A0A6YYD5 115 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 TCRBV16S1A1N1A0A5B0 115 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 TLDC2A0PJX2 215 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 A6NL46 340 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 H0YIV9 168 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 HRKO00198 91 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 DYNC1I1O14576 645 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 ERI3O43414 337 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 SUV39H1O43463 412 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 SPAG7O75391 227 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 CLEC3AO75596 197 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 CDC123O75794 336 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 KRT38O76015 456 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 IPO13O94829 963 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 SEC24DO94855 1032 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 SORBS2O94875 1100 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 TGFB1P01137 390 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 PDYNP01213 254 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 PLA2G2AP14555 144 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 PCSK2P16519 638 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 AGXTP21549 392 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 ATP5A1P25705 553 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 CNTFP26441 200 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 GRNP28799 593 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 TPP2P29144 1249 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 PTGER1P34995 402 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 NUP214P35658 2090 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 HCFC1P51610 2035 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 CCL11P51671 97 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 NR0B1P51843 470 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 PRKAA2P54646 552 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 LIM2P55344 173 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 RPS13P62277 151 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 BTN3A2P78410 334 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 IRF8Q02556 426 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 GALNT1Q10472 559 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 TBL3Q12788 808 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 ILF2Q12905 390 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 NFATC3Q12968 1075 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 DUSP8Q13202 625 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 NAA25Q14CX7 972 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 ZRSR2Q15696 482 aaKnown RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 FAM83EQ2M2I3 478 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 GGTA1PQ4G0N0 100 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 C4orf17Q53FE4 359 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 TAF1BQ53T94 588 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 BEND6Q5SZJ8 279 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 ZNF468Q5VIY5 522 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 C18orf63Q68DL7 685 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 TCTN3Q6NUS6 607 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 H3F3CQ6NXT2 135 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 ZYG11AQ6WRX3 759 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 C16orf47Q6ZP98 133 aaPredicted RBP4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 EXOC3L1Q86VI1 746 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 NINQ8N4C6 2090 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 KIF2BQ8N4N8 673 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 FAM47BQ8NA70 645 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 ZSCAN1Q8NBB4 408 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 CAMKVQ8NCB2 501 aa4.08□□□□□ -1.76
TRAV8-5-201ENST00000537369 APCDD1LQ8NCL9 501 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms