RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	LAS2	Q8IYD9	372 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	CYP4X1	Q8N118	509 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	EIF1AD	Q8N9N8	165 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	TTL	Q8NG68	377 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	OR2L5	Q8NG80	312 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	EPS8L3	Q8TE67	593 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	METTL21A	Q8WXB1	218 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	OR1F2P	Q96R84	312 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	CSF3R	Q99062	836 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	MS4A8	Q9BY19	250 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	NOL11	Q9H8H0	719 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	NECTIN3	Q9NQS3	549 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PRDM7	Q9NQW5	492 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PTGFRN	Q9P2B2	879 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PCTP	Q9UKL6	214 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	G3BP2	Q9UN86	482 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	ANGPTL3	Q9Y5C1	460 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	CCDC189	A1A4V9	331 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	CCDC151	A5D8V7	595 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296		A8MT66	165 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	MAGEB17	A8MXT2	336 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	DPM1	O60762	260 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	F10	P00742	488 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	SERPINA7	P05543	415 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	RNH1	P13489	461 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	NEK2	P51955	445 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	LAPTM5	Q13571	262 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	CPSF6	Q16630	551 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	TSNAXIP1	Q2TAA8	658 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	SFT2D3	Q587I9	215 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	AGAP7P	Q5VUJ5	663 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	FCRLB	Q6BAA4	426 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	HIST2H2AA3	Q6FI13	130 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	IGFL3	Q6UXB1	125 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	FAM47B	Q8NA70	645 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	PLPP5	Q8NEB5	264 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	OR2W6P	Q8NHA6	318 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	HUS1B	Q8NHY5	278 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	MTBP	Q96DY7	904 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	FAR2	Q96K12	515 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	AGAP4	Q96P64	663 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	MTERF1	Q99551	399 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	MRPL57	Q9BQC6	102 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	MRPL46	Q9H2W6	279 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	OR51B5	Q9H339	312 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	ACTR8	Q9H981	624 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	RIC8B	Q9NVN3	520 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	PSD3	Q9NYI0	1048 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	C5AR2	Q9P296	337 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	FETUB	Q9UGM5	382 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	PCDHGB7	Q9Y5F8	929 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	CLDN16	Q9Y5I7	305 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	MYO18B	Q8IUG5	2567 aa		10.18	□□□□□ -0.78
LDHA-215	ENST00000537296	IGKV3D-11	A0A0A0MRZ8	115 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	IQANK1	A0A1B0GTG1	560 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	MYOCOS	A0A1B0GUC4	107 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	TTLL8	A6PVC2	850 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	STX16-NPEPL1	H3BU86	382 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	STX16	O14662	325 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	MAN1A2	O60476	641 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	SMIM24	O75264	130 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	ETHE1	O95571	254 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	ALPP	P05187	535 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	RPS17	P08708	135 aa	Known RBP	10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	GSTM2	P28161	218 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	PPP2R1B	P30154	601 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	SOX11	P35716	441 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	HSD17B3	P37058	310 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	CDH13	P55290	713 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	LIM2	P55344	173 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	TRAF3	Q13114	568 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	BTBD16	Q32M84	506 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	LGSN	Q5TDP6	509 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	NIPAL1	Q6NVV3	410 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	TRIM40	Q6P9F5	258 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	PAPD4	Q6PIY7	484 aa	Known RBP	10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	IGFL2	Q6UWQ7	119 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	SH2D5	Q6ZV89	423 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	CUZD1	Q86UP6	607 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	CATSPER1	Q8NEC5	780 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	MTFMT	Q96DP5	389 aa	Known RBP	10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	C19orf60	Q96EN9	201 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	SEC16B	Q96JE7	1060 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	PTCHD1	Q96NR3	888 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	TUBB6	Q9BUF5	446 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	C12orf65	Q9H3J6	166 aa	Known RBP	10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	PRM3	Q9NNZ6	103 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	DMRT3	Q9NQL9	472 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	PLA2G3	Q9NZ20	509 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	EMCN	Q9ULC0	261 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	TNPO3	Q9Y5L0	923 aa	Known RBP	10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	FLNC	Q14315	2725 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296		A8MUA0	341 aa		10.17	□□□□□ -0.78
LDHA-215	ENST00000537296	CYR61	O00622	381 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms