RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ARAFP10398 606 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 RPL10P27635 214 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 HTR1BP28222 390 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 CMPK1P30085 196 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 SHMT2P34897 504 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 FRKP42685 505 aaPredicted RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 CDK6Q00534 326 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 TGM3Q08188 693 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 FBXO43Q4G163 708 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 EOGTQ5NDL2 527 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 ZNF691Q5VV52 312 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 TRIM69Q86WT6 500 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 CACUL1Q86Y37 369 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 ARMC8Q8IUR7 673 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 ERI1Q8IV48 349 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 ANKRD53Q8N9V6 530 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 ZBTB8BQ8NAP8 495 aaPredicted RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 ST13P5Q8NFI4 369 aaPredicted RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 DNASE1L2Q92874 299 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 SLC22A18Q96BI1 424 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 TM4SF18Q96CE8 201 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 NEURL3Q96EH8 262 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 PRAP1Q96NZ9 151 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 MBOAT4Q96T53 435 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 MRPS30Q9NP92 439 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 THSD1Q9NS62 852 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 IMP3Q9NV31 184 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 OR6C2Q9NZP2 312 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 PAIP2BQ9ULR5 123 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 GPSM3Q9Y4H4 160 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 TMEM247A6NEH6 219 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 MYO1GB0I1T2 1018 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 BCKDKO14874 412 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 NOL3O60936 208 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 ABCB7O75027 752 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 KLHL18O94889 574 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 CPNE6O95741 557 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 GLULP15104 373 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 NELFEP18615 380 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 SOX9P48436 509 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 IST1P53990 364 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 CSNK2BP67870 215 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 KCNJ10P78508 379 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 HPCAP84074 193 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 PLCL1Q15111 1095 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 C6orf141Q5SZD1 244 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 OR4C11Q6IEV9 310 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 KIAA1211LQ6NV74 962 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 ZNF554Q86TJ5 538 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 LINC01555Q8NAE3 123 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 OR2A1Q8NGT9 310 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 PSMA8Q8TAA3 256 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 GEMIN6Q8WXD5 167 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 NMD3Q96D46 503 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 TPD52L3Q96J77 140 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 DPH2Q9BQC3 489 aaPredicted RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 RPP25Q9BUL9 199 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 ZNF717Q9BY31 904 aaPredicted RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 RUBCNLQ9H714 662 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 CUEDC1Q9NWM3 386 aaPredicted RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 TAAR2Q9P1P5 351 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 KIF17Q9P2E2 1029 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 RAPGEFL1Q9UHV5 662 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 TMEFF2Q9UIK5 374 aaPredicted RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 SNX7Q9UNH6 387 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 ABCG2Q9UNQ0 655 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 CFAP20Q9Y6A4 193 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 A0A1W2PQF6 199 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
SMG6-203ENST00000536871 CLIC3O95833 236 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 GBAP04062 536 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 CRHBPP24387 322 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 EEF1B2P24534 225 aaKnown RBP12.94□□□□□ -0.34
SMG6-203ENST00000536871 MANFP55145 182 aaKnown RBP12.94□□□□□ -0.34
SMG6-203ENST00000536871 DSTNP60981 165 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 YPEL5P62699 121 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 VLDLRP98155 873 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 MC1RQ01726 317 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 MLF2Q15773 248 aaPredicted RBP12.94□□□□□ -0.34
SMG6-203ENST00000536871 RPE65Q16518 533 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 BHLHB9Q6PI77 547 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 ISLR2Q6UXK2 745 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 OR52E1Q8NGJ3 308 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 FBLIM1Q8WUP2 373 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 F2RL3Q96RI0 385 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 NPLQ9BXD5 320 aaPredicted RBP12.94□□□□□ -0.34
SMG6-203ENST00000536871 AMBRA1Q9C0C7 1298 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 EPS8L2Q9H6S3 715 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 A4GALTQ9NPC4 353 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 MOSPD1Q9UJG1 213 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 UTS2RQ9UKP6 389 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 PCOLCE2Q9UKZ9 415 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 KCNK6Q9Y257 313 aa12.94□□□□□ -0.34
SMG6-203ENST00000536871 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
SMG6-203ENST00000536871 PRSS38A1L453 326 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms