RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 RBM4BQ9BQ04 359 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DCUN1D5Q9BTE7 237 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ACAT2Q9BWD1 397 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RBM4Q9BWF3 364 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 POLR1BQ9H9Y6 1135 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 UCKL1Q9NWZ5 548 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CDC14AQ9UNH5 594 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ICKQ9UPZ9 632 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PCDH15Q96QU1 1955 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ASXL3Q9C0F0 2248 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 KCNJ13O60928 360 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PRKD3O94806 890 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ATE1O95260 518 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SP9P0CG40 484 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CD22P20273 847 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 S100A3P33764 101 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SLC19A1P41440 591 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 HALP42357 657 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PLIN5Q00G26 463 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ABHD18Q0P651 414 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PLCL1Q15111 1095 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CPSF6Q16630 551 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ANKDD1AQ495B1 522 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SGO1Q5FBB7 561 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CEP68Q76N32 757 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF761Q86XN6 746 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NAGSQ8N159 534 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TMEM132CQ8N3T6 1108 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR13F1Q8NGS4 319 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR56A3Q8NH54 315 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR5K1Q8NHB7 308 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FBXO30Q8TB52 745 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 LMX1AQ8TE12 382 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FAM162AQ96A26 154 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 REXO5Q96IC2 774 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GSDMCQ9BYG8 508 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TOR3AQ9H497 397 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FAM118AQ9NWS6 357 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FBXO4Q9UKT5 387 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PCOLCE2Q9UKZ9 415 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DLGAP4Q9Y2H0 992 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SNX11Q9Y5W9 270 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PATE3B3GLJ2 98 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 H3BMQ9 156 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ABCB7O75027 752 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ERGP11308 486 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PCNAP12004 261 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MAGEA2P43356 314 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 C21orf59P57076 290 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GABARAPL2P60520 117 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SPIDRQ14159 915 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 KRT33BQ14525 404 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GTDC1Q4AE62 458 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZC3H12BQ5HYM0 836 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BROXQ5VW32 411 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ADNP2Q6IQ32 1131 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 EID3Q8N140 333 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZCCHC7Q8N3Z6 543 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FAM174AQ8TBP5 190 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TBC1D15Q8TC07 691 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SLC37A2Q8TED4 501 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ATL1Q8WXF7 558 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PIGKQ92643 395 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NEIL2Q969S2 332 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 COX4I2Q96KJ9 171 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 COG8Q96MW5 612 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MBOAT4Q96T53 435 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ELOVL6Q9H5J4 265 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SLC6A13Q9NSD5 602 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PILRBQ9UKJ0 227 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MAGED1Q9Y5V3 778 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TMX2-CTNND1H3BSU7 103 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PRMT3O60678 531 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 UGDHO60701 494 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SEC14L2O76054 403 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RPN2P04844 631 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 AMD1P17707 334 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SDC1P18827 310 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CRHBPP24387 322 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TRPC1P48995 793 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BLKP51451 505 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TMBIM6P55061 237 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 C21orf58P58505 322 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TOP3AQ13472 1001 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DPY19L1Q2PZI1 675 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DEFB133Q30KQ1 61 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RFX4Q33E94 735 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZIK1Q3SY52 487 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 WASH2PQ6VEQ5 465 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DCP2Q8IU60 420 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FAM20CQ8IXL6 584 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FAM46DQ8NEK8 389 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CXorf40BQ96DE9 158 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FAM120BQ96EK7 910 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PYURFQ96I23 114 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms