RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 VASH2Q86V25 355 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 SYCP3Q8IZU3 236 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 BEST3Q8N1M1 668 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 CIARTQ8N365 385 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-207ENST00000536634 MAPK15Q8TD08 544 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 MAGEC3Q8TD91 643 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 CCDC127Q96BQ5 260 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 ORAI1Q96D31 301 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 PERPQ96FX8 193 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 CALML4Q96GE6 196 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 AK8Q96MA6 479 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 MTERF1Q99551 399 aaKnown RBP5.09□□□□□ -1.59
CLIP1-207ENST00000536634 OMDQ99983 421 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 SEMA3CQ99985 751 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 FUCA2Q9BTY2 467 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 KLHL1Q9NR64 748 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 EXOC7Q9UPT5 735 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 NCKAP1Q9Y2A7 1128 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF510Q9Y2H8 683 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 AMDHD2Q9Y303 409 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 KIF3AQ9Y496 699 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 CCDC168Q8NDH2 2452 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 NIPBLQ6KC79 2804 aaeCLIP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 A0A0B4J293 547 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 FRMD3A2A2Y4 597 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 KRT86O43790 486 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 RTN2O75298 545 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 FAM200BP0CF97 657 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 RNF224P0DH78 156 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 THEGLP0DJG4 465 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 MYOD1P15172 320 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 GOT1P17174 413 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 TNNI1P19237 187 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 CSKP41240 450 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 DUSP3P51452 185 aaPredicted RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 NDST1P52848 882 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 CSNK2A1P68400 391 aaPredicted RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 COG7P83436 770 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 CYP24A1Q07973 514 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 TMEM115Q12893 351 aaPredicted RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 KRT81Q14533 505 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 PSMD6Q15008 389 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 E2F5Q15329 346 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 SNRNP35Q16560 246 aaKnown RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 CDKN3Q16667 212 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 HNRNPA1L2Q32P51 320 aaKnown RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 ZNF542PQ5EBM4 170 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 INTS11Q5TA45 600 aaKnown RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 SIGIRRQ6IA17 410 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 MMS22LQ6ZRQ5 1243 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 DPPA4Q7L190 304 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 EFL1Q7Z2Z2 1120 aaKnown RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 CCDC186Q7Z3E2 898 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 DSG4Q86SJ6 1040 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 IQCHQ86VS3 1027 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 SLC22A18ASQ8N1D0 253 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 STK40Q8N2I9 435 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 FAM184AQ8NB25 1140 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 CSNK2A3Q8NEV1 391 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 ZNF564Q8TBZ8 553 aaPredicted RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 NDRG1Q92597 394 aaKnown RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 FAM131CQ96AQ9 280 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 MMABQ96EY8 250 aaPredicted RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 EPSTI1Q96J88 318 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 FEM1CQ96JP0 617 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 LLPHQ9BRT6 129 aaKnown RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 ABCG4Q9H172 646 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 OLFML3Q9NRN5 406 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 ACSS1Q9NUB1 689 aaPredicted RBP5.08□□□□□ -1.6
CLIP1-207ENST00000536634 SUN2Q9UH99 717 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 CYTH4Q9UIA0 394 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 SCML1Q9UN30 329 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 LOXL2Q9Y4K0 774 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 FBN3Q75N90 2809 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 UNC13CQ8NB66 2214 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 SDK2Q58EX2 2172 aa5.08□□□□□ -1.6
CLIP1-207ENST00000536634 UBE4BO95155 1302 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 GOLGA6L7A0A1B0GV03 622 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 CCDC189A1A4V9 331 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 PAGE4O60829 102 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 RNASEH1O60930 286 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 SEC14L2O76054 403 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 NKX2-2O95096 273 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 PLGP00747 810 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 ATP5BP06576 529 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 RALAP11233 206 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 PRLRP16471 622 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 GAP43P17677 238 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 POLR2EP19388 210 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 NUMBP49757 651 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 STK19P49842 368 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 OLR1P78380 273 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 HMGN5P82970 282 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 CEBPZQ03701 1054 aaKnown RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 OVGP1Q12889 678 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 TBX2Q13207 712 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 ZNF177Q13360 481 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-207ENST00000536634 OLIG2Q13516 323 aa5.07□□□□□ -1.6
CLIP1-207ENST00000536634 DCTN2Q13561 401 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms