RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 HPDP32754 393 aaPredicted RBP16.94■□□□□ 0.3
CCDC61-201ENST00000536603 CCT5P48643 541 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 EFNA3P52797 238 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 PLA2G16P53816 162 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 CPSF6Q16630 551 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCDC61-201ENST00000536603 ADPRMQ3LIE5 342 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 CROCCP2Q86T23 111 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 HPS6Q86YV9 775 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 OR2L5Q8NG80 312 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 OR11G2Q8NGC1 345 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 VPS50Q96JG6 964 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 CDK15Q96Q40 435 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 F2RL3Q96RI0 385 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 NUDT9Q9BW91 350 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 RBCK1Q9BYM8 510 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 VN1R1Q9GZP7 353 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 SEMA4BQ9NPR2 832 aaPredicted RBP16.94■□□□□ 0.3
CCDC61-201ENST00000536603 ATP13A2Q9NQ11 1180 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 FBXL4Q9UKA2 621 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 ESPL1Q14674 2120 aa16.94■□□□□ 0.3
CCDC61-201ENST00000536603 ALOX12BO75342 701 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
CCDC61-201ENST00000536603 CLDN9O95484 217 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 TGFB1P01137 390 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 RPS17P08708 135 aaKnown RBP16.93■□□□□ 0.3
CCDC61-201ENST00000536603 ACPPP15309 386 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 IL10P22301 178 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 ATP5F1P24539 256 aaPredicted RBP16.93■□□□□ 0.3
CCDC61-201ENST00000536603 COL8A1P27658 744 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 CDH13P55290 713 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 RAPSNQ13702 412 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 DDX39BQ13838 428 aaKnown RBP16.93■□□□□ 0.3
CCDC61-201ENST00000536603 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 SLC6A19Q695T7 634 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 TRIM40Q6P9F5 258 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 RNF175Q8N4F7 328 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 BANPQ8N9N5 519 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 L3MBTL4Q8NA19 623 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 HUS1BQ8NHY5 278 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 PNPLA2Q96AD5 504 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 TBC1D20Q96BZ9 403 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 OR1F2PQ96R84 312 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 MTERF1Q99551 399 aaKnown RBP16.93■□□□□ 0.3
CCDC61-201ENST00000536603 NTMT1Q9BV86 223 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 C1QTNF3Q9BXJ4 246 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 MS4A8Q9BY19 250 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 CLK4Q9HAZ1 481 aaKnown RBP16.93■□□□□ 0.3
CCDC61-201ENST00000536603 ADGRE2Q9UHX3 823 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 EMCNQ9ULC0 261 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 GRID1Q9ULK0 1009 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 PCDHGA11Q9Y5H2 935 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 SHANK1Q9Y566 2161 aa16.93■□□□□ 0.3
CCDC61-201ENST00000536603 H0YIV9 168 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 PPP6CO00743 305 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 COPEO14579 308 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 SPAG7O75391 227 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 CEACAM4O75871 244 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 SUPT7LO94864 414 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 FHP07954 510 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 C8orf89P0DMQ9 161 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 TSPAN8P19075 237 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 SERPINB1P30740 379 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 CRHR1P34998 444 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 HERVK_113P63132 956 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 EEF1A2Q05639 463 aaKnown RBP16.92■□□□□ 0.3
CCDC61-201ENST00000536603 TGM3Q08188 693 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 ZRSR2Q15696 482 aaKnown RBP16.92■□□□□ 0.3
CCDC61-201ENST00000536603 AGBL2Q5U5Z8 902 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 ZNF787Q6DD87 383 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 ABHD17CQ6PCB6 329 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 CHSY3Q70JA7 882 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 MAMDC2Q7Z304 686 aaPredicted RBP16.92■□□□□ 0.3
CCDC61-201ENST00000536603 MILR1Q7Z6M3 343 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 SLC22A9Q8IVM8 553 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 GALNT16Q8N428 558 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 Q8NA96 180 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 PPP4R1Q8TF05 950 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 ZNF483Q8TF39 744 aaPredicted RBP16.92■□□□□ 0.3
CCDC61-201ENST00000536603 METTL21AQ8WXB1 218 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 REPS1Q96D71 796 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 CMTM7Q96FZ5 175 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 ERVK-6Q9BXR3 956 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 OR51B5Q9H339 312 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 LANCL2Q9NS86 450 aa16.92■□□□□ 0.3
CCDC61-201ENST00000536603 SPTBN1Q01082 2364 aaKnown RBP16.92■□□□□ 0.3
CCDC61-201ENST00000536603 SPTAN1Q13813 2472 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 A0A088AWK7 358 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 SAP18O00422 153 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 ATP8B1O43520 1251 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 B4GALT2O60909 372 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 RNH1P13489 461 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 IMPDH1P20839 514 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 ZNF10P21506 573 aaPredicted RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 PIK3CBP42338 1070 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 NEK2P51955 445 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 PRKAA2P54646 552 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 MAGOHP61326 146 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 TRAF3Q13114 568 aa16.91■□□□□ 0.3
CCDC61-201ENST00000536603 AIMP2Q13155 320 aaKnown RBP16.91■□□□□ 0.3
CCDC61-201ENST00000536603 RUNX2Q13950 521 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms