RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 C1QTNF6Q9BXI9 259 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 IFT22Q9H7X7 185 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 AIG1Q9NVV5 245 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 PDP1Q9P0J1 537 aaPredicted RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 WASHC1A8K0Z3 465 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 H3BM21 787 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 GFRA2O00451 464 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 SLC25A14O95258 325 aaPredicted RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 PTHP01270 115 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 HOXD4P09016 255 aaPredicted RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 BPIP17213 487 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 MAP2K6P52564 334 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 MAB21L1Q13394 359 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 NFE2L1Q14494 772 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 PYDC2Q56P42 97 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 GPR153Q6NV75 609 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 LILRA6Q6PI73 481 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 GCNT7Q6ZNI0 430 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 CCDC149Q6ZUS6 474 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 DGLUCYQ7Z3D6 616 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 ST8SIA4Q92187 359 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 DCLRE1CQ96SD1 692 aaKnown RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 GPR83Q9NYM4 423 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 TNFRSF10DQ9UBN6 386 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 TRAPPC4Q9Y296 219 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 NPIPB15A6NHN6 443 aaPredicted RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 ZNF821O75541 412 aaPredicted RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 PPM1BO75688 479 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 PDE9AO76083 593 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 OR4F21O95013 312 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 ESR1P03372 595 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 SRCP12931 536 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 SLC19A1P41440 591 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 GPR85P60893 370 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 RPP38P78345 283 aaKnown RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 SLC7A9P82251 487 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 TSTQ16762 297 aaKnown RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 POM121L1PQ3SYA9 428 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 RDH10Q8IZV5 341 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 OR2AP1Q8NGE2 309 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 OR52B6Q8NGF0 335 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 FIBINQ8TAL6 211 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 SORCS1Q8WY21 1168 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 KCNJ9Q92806 393 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 RERGLQ9H628 205 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 KRT84Q9NSB2 600 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 HCFC2Q9Y5Z7 792 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 V9GYH0 126 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 LINC01387J3KSC0 135 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ZNF7P17097 686 aaPredicted RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 CD72P21854 359 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ALAS2P22557 587 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 SERPINA4P29622 427 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 CLCN7P51798 805 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 PER3P56645 1201 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 FGFBP1Q14512 234 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 CCDC85BQ15834 202 aaPredicted RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 CARD16Q5EG05 197 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 TEX261Q6UWH6 196 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 DLEU7Q6UYE1 221 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 CCDC71Q8IV32 467 aaPredicted RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 PHACTR4Q8IZ21 702 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ING5Q8WYH8 240 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 MTERF3Q96E29 417 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 GTPBP2Q9BX10 602 aaKnown RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 RACGAP1Q9H0H5 632 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 RDH8Q9NYR8 311 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 VAPAQ9P0L0 249 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 CD84Q9UIB8 345 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 HSPE1-MOB4S4R3N1 261 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 U3KQ87 197 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 GLYATL1P3A0A0U1RQE8 302 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 TSPAN19P0C672 248 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 EFNA1P20827 205 aaPredicted RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 CTNNB1P35222 781 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 GDF5P43026 501 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ZFP36L2P47974 494 aaKnown RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 RUNX1T1Q06455 604 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 NFATC2Q13469 925 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 KEAP1Q14145 624 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 DMC1Q14565 340 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ZC3H12BQ5HYM0 836 aaKnown RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 ANKRD54Q6NXT1 300 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 Q6ZVU0 165 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 REPS1Q96D71 796 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 DPCDQ9BVM2 203 aaPredicted RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 SRRQ9GZT4 340 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 SERHL2Q9H4I8 314 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 GALNT9Q9HCQ5 603 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ABCB9Q9NP78 766 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 FAM8A1Q9UBU6 413 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ZNF225Q9UK10 706 aa13.41□□□□□ -0.26
LIG1-203ENST00000536218 ZNF490Q9ULM2 529 aaPredicted RBP13.41□□□□□ -0.26
LIG1-203ENST00000536218 ELOVL7A1L3X0 281 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 FAM234BA2RU67 622 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 GAPDHSO14556 408 aaPredicted RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 FOSL1P15407 271 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 RPL35P42766 123 aaKnown RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 PROX2Q3B8N5 592 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms