RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 KLHL18O94889 574 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 ANXA8P13928 327 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 ITGA2P17301 1181 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 IDH2P48735 452 aaKnown RBP12.58□□□□□ -0.39
LDLR-203ENST00000535915 FOXD4Q12950 439 aaPredicted RBP12.58□□□□□ -0.39
LDLR-203ENST00000535915 EXOC3L2Q2M3D2 409 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 TMEM236Q5W0B7 351 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 FAM180BQ6P0A1 224 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 TMIGD1Q6UXZ0 262 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.39
LDLR-203ENST00000535915 VMP1Q96GC9 406 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 ZNF514Q96K75 400 aaPredicted RBP12.58□□□□□ -0.39
LDLR-203ENST00000535915 ACAT2Q9BWD1 397 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 TMEM38AQ9H6F2 299 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 AMBNQ9NP70 447 aa12.58□□□□□ -0.39
LDLR-203ENST00000535915 MRPS23Q9Y3D9 190 aaKnown RBP12.58□□□□□ -0.39
LDLR-203ENST00000535915 MYO10Q9HD67 2058 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 KIAA0100Q14667 2235 aaKnown RBP12.58□□□□□ -0.4
LDLR-203ENST00000535915 FUOMA2VDF0 154 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 J3KTA2 159 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 PI15O43692 258 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 ADH1CP00326 375 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 FUCA1P04066 466 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 GSTT2P0CG29 244 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 GSTT2BP0CG30 244 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 PIK3CBP42338 1070 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 MICAQ29983 383 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 PRSS53Q2L4Q9 553 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 PRAMEF14Q5SWL7 426 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 PRAMEF13Q5VWM6 474 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 EGFLAMQ63HQ2 1017 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 CELF5Q8N6W0 485 aaKnown RBP12.58□□□□□ -0.4
LDLR-203ENST00000535915 DYNC2LI1Q8TCX1 351 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 S100ZQ8WXG8 99 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 OR8D1Q8WZ84 308 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 UBE2E3Q969T4 207 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 LGALS12Q96DT0 336 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 ERLEC1Q96DZ1 483 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 SIGLEC11Q96RL6 698 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 NIPSNAP1Q9BPW8 284 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 ALOXE3Q9BYJ1 711 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 IL23AQ9NPF7 189 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 AKIP1Q9NQ31 210 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 POFUT2Q9Y2G5 429 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 SNX8Q9Y5X2 465 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 C17orf113A0A1B0GUU1 675 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 PRAMEF25A6NGN4 478 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 ADRB3P13945 408 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 PTX3P26022 381 aaPredicted RBP12.58□□□□□ -0.4
LDLR-203ENST00000535915 ACADLP28330 430 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 C21orf33P30042 268 aaPredicted RBP12.58□□□□□ -0.4
LDLR-203ENST00000535915 ELOAQ14241 798 aaKnown RBP12.58□□□□□ -0.4
LDLR-203ENST00000535915 SYT16Q17RD7 645 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 ZNF630Q2M218 657 aaPredicted RBP12.58□□□□□ -0.4
LDLR-203ENST00000535915 MMP21Q8N119 569 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 OR4C15Q8NGM1 316 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 OR2L2Q8NH16 312 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 UTP15Q8TED0 518 aaKnown RBP12.58□□□□□ -0.4
LDLR-203ENST00000535915 PROX1Q92786 737 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 MTERF3Q96E29 417 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 ITPAQ9BY32 194 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 ZDHHC5Q9C0B5 715 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 SLC6A16Q9GZN6 736 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 DPEP2Q9H4A9 486 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 THSD1Q9NS62 852 aa12.58□□□□□ -0.4
LDLR-203ENST00000535915 KIAA0355O15063 1070 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 PAPLNO95428 1278 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 KRT75O95678 551 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 IFNA14P01570 189 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 POU2F1P14859 743 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 BMPR1AP36894 532 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 TGFBR2P37173 567 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 SLC6A11P48066 632 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 C9orf64Q5T6V5 341 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 UBE2UQ5VVX9 321 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 FAM83HQ6ZRV2 1179 aaPredicted RBP12.57□□□□□ -0.4
LDLR-203ENST00000535915 ZNF765Q7L2R6 523 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 RTL10Q7L3V2 364 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 PLD3Q8IV08 490 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 OR9Q2Q8NGE9 314 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 OR5AR1Q8NGP9 310 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
LDLR-203ENST00000535915 GEMIN6Q8WXD5 167 aaKnown RBP12.57□□□□□ -0.4
LDLR-203ENST00000535915 LINC00615Q96LM1 132 aaPredicted RBP12.57□□□□□ -0.4
LDLR-203ENST00000535915 C11orf49Q9H6J7 331 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 EPS8L2Q9H6S3 715 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 ZNF556Q9HAH1 456 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 PSORS1C1Q9UIG5 152 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 DAPK2Q9UIK4 370 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 RAB23Q9ULC3 237 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 PNMA8BQ9ULN7 279 aaPredicted RBP12.57□□□□□ -0.4
LDLR-203ENST00000535915 ANGPT4Q9Y264 503 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 SLC27A6Q9Y2P4 619 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 FAM32AQ9Y421 112 aaKnown RBP12.57□□□□□ -0.4
LDLR-203ENST00000535915 PMF1-BGLAPU3KQ54 211 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 DENND4AQ7Z401 1863 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 HEATR5BQ9P2D3 2071 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 PRAMEF33A0A0G2JMD5 474 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 EFCAB9A8MZ26 197 aa12.57□□□□□ -0.4
LDLR-203ENST00000535915 PRAMEF10O60809 474 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms