RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PRB1P04280 392 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 JAK1P23458 1154 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 PTX3P26022 381 aaPredicted RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 NAGLUP54802 743 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 EEF1A2Q05639 463 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 LCP2Q13094 533 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 TNFAIP8L3Q5GJ75 292 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 C10orf62Q5T681 223 aaPredicted RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 LANCL3Q6ZV70 420 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 GPRIN3Q6ZVF9 776 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 CCNYL1Q8N7R7 359 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 CLEC1AQ8NC01 280 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 ARMC2Q8NEN0 867 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 FDCSPQ8NFU4 85 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 C9orf43Q8TAL5 461 aaPredicted RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 MTFMTQ96DP5 389 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 ROGDIQ9GZN7 287 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 IQCGQ9H095 443 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 SLC25A18Q9H1K4 315 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 COPS7BQ9H9Q2 264 aaPredicted RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 ATP13A2Q9NQ11 1180 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 SLC17A7Q9P2U7 560 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 PCDHGA9Q9Y5G4 932 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 SPTA1P02549 2419 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 KALRNO60229 2985 aa21.39■■□□□ 1.02
SFSWAP-204ENST00000535399 IGHV1-45A0A0A0MS14 117 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 K7EM74 188 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 PSMD12O00232 456 aaPredicted RBP21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 PLPP1O14494 284 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 C1QL1O75973 258 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 HIST1H1TP22492 207 aaPredicted RBP21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 LIM2P55344 173 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 SOX8P57073 446 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 RAB38P57729 211 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 IFT88Q13099 833 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 AIMP2Q13155 320 aaKnown RBP21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 CUL3Q13618 768 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 PCLAFQ15004 111 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 PCOLCEQ15113 449 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 TTC19Q6DKK2 380 aaPredicted RBP21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 NDUFAF7Q7L592 441 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 ANKRD37Q7Z713 158 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 C10orf107Q8IVU9 208 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 ACOT4Q8N9L9 421 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 TCP10LQ8TDR4 215 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 METTL21AQ8WXB1 218 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 TSLPQ969D9 159 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 RGMAQ96B86 450 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 FAM111AQ96PZ2 611 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 SLC25A23Q9BV35 468 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 SORBS1Q9BX66 1292 aaKnown RBP21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF717Q9BY31 904 aaPredicted RBP21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF700Q9H0M5 742 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 ELOVL6Q9H5J4 265 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 MLXIPLQ9NP71 852 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 KCMF1Q9P0J7 381 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 SENP1Q9P0U3 644 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 DAPP1Q9UN19 280 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 TP53TG5Q9Y2B4 290 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 STK38LQ9Y2H1 464 aa21.39■■□□□ 1.01
SFSWAP-204ENST00000535399 TYROBPO43914 113 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 PDGFAP04085 211 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 SSR2P43308 183 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 RAP1GDS1P52306 607 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 ARFIP1P53367 373 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 PKNOX1P55347 436 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 BTG2P78543 158 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 Q0VFX4 171 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 ABRAXAS2Q15018 415 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 AP5B1Q2VPB7 878 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 SGO1Q5FBB7 561 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 LIPMQ5VYY2 423 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 OR4C11Q6IEV9 310 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 TCTN3Q6NUS6 607 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 QSOX2Q6ZRP7 698 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 FRMD7Q6ZUT3 714 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 GALNT16Q8N428 558 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 CDYL2Q8N8U2 506 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 ZBTB9Q96C00 473 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 SERPINI1Q99574 410 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 CENPKQ9BS16 269 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 NUDT9Q9BW91 350 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 SLC29A3Q9BZD2 475 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF160Q9HCG1 818 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 LYRM4Q9HD34 91 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF71Q9NQZ8 489 aaPredicted RBP21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 FARSBQ9NSD9 589 aaKnown RBP21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 SNX6Q9UNH7 406 aa21.38■■□□□ 1.01
SFSWAP-204ENST00000535399 BSNQ9UPA5 3926 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 BOD1L1Q8NFC6 3051 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 CYR61O00622 381 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 UBFD1O14562 309 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 NR1D1P20393 614 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 TSFMP43897 325 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 NAA20P61599 178 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 NSDHLQ15738 373 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 LACTB2Q53H82 288 aaPredicted RBP21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 TCHHL1Q5QJ38 904 aaPredicted RBP21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 CPEB2Q7Z5Q1 589 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 CROCCP2Q86T23 111 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms