RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	SELENON	Q9NZV5	590 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LARS	Q9P2J5	1176 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KCNN3	Q9UGI6	736 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	AMACR	Q9UHK6	382 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OSGIN1	Q9UJX0	560 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PILRA	Q9UKJ1	303 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RNF113A	O15541	343 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MAGEC1	O60732	1142 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LMO1	P25800	156 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	BDKRB2	P30411	391 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	STX2	P32856	288 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RPL3	P39023	403 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ENTPD1	P49961	510 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NUDT6	P53370	316 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CCL7	P80098	99 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ABAT	P80404	500 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZFP36L1	Q07352	338 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ITGB3BP	Q13352	177 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CAMK2D	Q13557	499 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SCARB2	Q14108	478 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ATP13A5	Q4VNC0	1218 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FSCB	Q5H9T9	825 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KRBOX4	Q5JUW0	171 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FNBP1L	Q5T0N5	605 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DCST1	Q5T197	706 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FAM69B	Q5VUD6	431 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OTUD1	Q5VV17	481 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FRG2	Q64ET8	278 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TEX38	Q6PEX7	206 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PAPD4	Q6PIY7	484 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CHERP	Q8IWX8	916 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PCDH20	Q8N6Y1	951 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NRAC	Q8N912	160 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	XXYLT1	Q8NBI6	393 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CFAP61	Q8NHU2	1237 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GSDMB	Q8TAX9	411 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TAS1R2	Q8TE23	839 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GRHL3	Q8TE85	626 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OIT3	Q8WWZ8	545 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CCDC51	Q96ER9	411 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZNF830	Q96NB3	372 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DDO	Q99489	341 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ADPGK	Q9BRR6	497 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GPATCH1	Q9BRR8	931 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TMEM79	Q9BSE2	394 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NUDT9	Q9BW91	350 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FOXP1	Q9H334	677 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TMPRSS5	Q9H3S3	457 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	C17orf75	Q9HAS0	396 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	IL1RAPL2	Q9NP60	686 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NRBP2	Q9NSY0	501 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OLAH	Q9NV23	265 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TAS2R14	Q9NYV8	317 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PTGFRN	Q9P2B2	879 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PAM16	Q9Y3D7	125 aa		4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FAM90A26	D6RGX4	464 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CLDN4	O14493	209 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MEIS2	O14770	477 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PIN1P1	O15428	100 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SPINT2	O43291	252 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ERLIN2	O94905	339 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FYN	P06241	537 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CCDC175	P0C221	793 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FGF3	P11487	239 aa	Predicted RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	IFNAR1	P17181	557 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	UGT1A1	P22309	533 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HRH2	P25021	359 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NMBR	P28336	390 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	AXL	P30530	894 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FASLG	P48023	281 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ARSE	P51690	589 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ZNF132	P52740	706 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HMGA2	P52926	109 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CDH13	P55290	713 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SIRPA	P78324	504 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MAD2L1	Q13257	205 aa	Predicted RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	UPP1	Q16831	310 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SYT16	Q17RD7	645 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DEFB133	Q30KQ1	61 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	AMZ1	Q400G9	498 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CBWD6	Q4V339	395 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FAM98B	Q52LJ0	330 aa	Known RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CBWD3	Q5JTY5	395 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PXDC1	Q5TGL8	231 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TMEM211	Q6ICI0	200 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TYW3	Q6IPR3	259 aa	Known RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NOTUM	Q6P988	496 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	KCTD18	Q6PI47	426 aa	Predicted RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	INTS8	Q75QN2	995 aa	Known RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CCDC186	Q7Z3E2	898 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SLC38A9	Q8NBW4	561 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	STKLD1	Q8NE28	680 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FDCSP	Q8NFU4	85 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OR10S1	Q8NGN2	331 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.21	□□□□□ -1.74

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